Material and Methods
Materials and Reagents
All 14 Chinese medicinal materials were purchased from real estate areas or main production
areas ([Table 1 ]), and all complied with the relevant regulations of the Chinese Pharmacopoeia 2020
Edition Part 1.[16 ]
The reference standards cinnamaldehyde (98.0%, lot:7713), hesperidin (95.3%, lot:110721-201115),
naringin (98.0%, lot:13822), gardenoside (98.0%, lot:15277), calceolarioside B (98.0%,
lot:9644), 5-O- methylvisammioside (98.0%, lot:14863), and prim-O- glucosylcimifugin (98.0%, lot:14585) were purchased from the China Institute for the
Control of Food and Drug Products. Liquid chromatography-MS (LC-MS)-grade acetonitrile
(ThermoFisher, United States), methanol (ThermoFisher, United States), formic acid
(ThermoFisher, United States), and deionized water prepared by a Millipore Alpha-Q
water purification system (Millipore, United States) were used as the mobile phase
for the chromatographic separation. Other reagents were of analytical grade.
Preparation of Standards and Samples
Preparation of Standards and Samples of UPLC-Q-TOF-MS
All reference materials were dissolved in methanol to prepare solutions of cinnamaldehyde
(12.4 μg/mL), hesperidin (198 μg/mL), naringin (26 μg/mL), gardenoside (31 μg/mL),
calceolarioside B (45 μg/mL), 5-O- methylvisammioside (57 μg/mL), and prim-O- glucosylcimifugin (62 μg/mL).
According to the “History of Science and Technology in China: Volume of Weights and
Measures,” and by comparing it with the “Key Information Table of Ancient Classic
Prescriptions (7 Prescriptions),”[17 ]
[18 ] 3.73 g of each of Cangzhu, Houpo, Chenpi, Zexie, Fuling, Zhuling, Baizhu, Zhizi,
Mutong, Fangfeng, and Huashi were weighed, and 1.12 g of each of Rougui and Gancao
were weighed. These materials were soaked in 400 mL of ultrapure water for 30 minutes,
then 0.22 g of Dengxincao was added. All the materials were boiled over high fire
and then simmered until the liquid amount was 320 mL, to obtain the complete decoction.
After the above preparation, the decoction was frozen into freeze-dried powder at
−55°C, 500 Pa using a Buchi Lyovapor L-200 (Buchi, Swiss).
All samples were dissolved in methanol and each was prepared into a solution of 10 mg/mL
for UPLC-QTOF-MS. The sample solutions and standard solutions were filtered through
0.22 µm microporous filter membrane.
Preparation of Samples of GC-MS
The method for preparing CWD samples was the same as that of the UPLC-Q-TOF-MS mentioned
above. After the preparation and lyophilization, approximately 1 g of freeze-dried
powder was weighed for GC-MS of each decoction sample.
Instrumentation and Conditions
Instrumentation and Conditions of UPLC-Q-TOF-MS
The UPLC-Q-TOF MS analysis was performed using a Waters Acquity UPLC system coupled
with a Xevo G2-XS QTOF mass spectrometer (Waters, United States) with an electrospray
ionization ion source in MSE mode.
The chromatographic separation process was performed on a Thermo-Accucore aQ C18 (100 mm × 2.1 mm,
2.6 μm; ThermoFisher, United States) at 25°C, with a mobile phase consisting of acetonitrile
(A) and 0.1% formic acid aqueous solution (B). The gradient elution was as follows:
0–20 minutes, 5–25% eluent A; 20–30 minutes, 25–45% eluent A; 30–40 minutes, 45–70%
eluent A; 40–45 minutes, 70–95% eluent A. The flow rate was 0.3 mL/min.
MS conditions were operated in both positive and negative ion modes and applied as
follows: solvent gas temperature (nitrogen), 450°C; capillary voltage, 3.5 KV; an
ion source temperature, 120°C; desolvation gas flow, 500 L/h; cone gas flow, 100 L/h;
the low collision energy, 6 eV; the high collision energy, 25 to 60 eV.
Instrumentation and Conditions of GC-MS
The GC-MS analysis was performed using a 7890B GC-5977A MS combined instrument (Agilent,
United States) in full spectrum scanning mode.
The chromatographic separation process was performed on an HP-5MS UI (0.25 mm × 30
m × 0.25 μm; Agilent, United States). The temperature gradient was as follows: 0–3 minutes,
40°C; 3–23 minutes, 40–240°C; 23–24 minutes, 240°C; 24–28 minutes, 240–280°C; 28–33 minutes,
280°C. The injection volume was 1 μL of headspace injection. The injection port temperature
was 250°C, the flow rate was 1 mL/min, the split ratio was 10:1, the equilibrium temperature
of the sample was 85°C, and the balance time was 30 minutes.
MS conditions were as follows: solvent gas temperature (nitrogen) was 450°C, quality
scanning range was 40 to 600 Da; an ion source temperature was 230°C; and quadrupole
temperature was 150°C. The solvent delay time was 4 minutes.
Data Processing and Compound Identification
Masslynx 4.1 software (Waters, United States) and UNIFI v1.8 Analysis Platform (Waters,
United States) were used to analyze the mass spectra peaks of CWD in positive and
negative ion modes. According to the comparison of reference standards or references,
the compounds were identified by UV spectrum, retention time, excimer ion peak, molecular
formula, fragment ions, and other information combined with the SciFinder database.
Methods of Research on Network Pharmacology
Active Component Collection of CWD
On the basis of confirming the ingredients of CWD, oral bioavailability (OB) and drug-likeness
property (DL) parameters were analyzed using the Traditional Chinese Medicine Systems
Pharmacology Database and Analysis Platform (TCMSP; https://old.tcmsp-e.com/index.php).
The active ingredients of various medicinal herbs were screened with the set of OB
≥30% and DL ≥0.18 as standards based on the investigation of relevant literature.
Gene names corresponding to targets were identified from the protein database Uniprot
(https://www.uniprot.org ). The potential targets of each active molecule were screened using the target prediction
tool SwissTargetPrediction (http://swisstargetprediction.ch/ ).
Collection of Therapeutic Targets for Eczema and Herpes Zoster
The keywords “eczema” and “herpes zoster” were used to search through the Drugbank
database (https://go.drugbank.com/ ), the Genecards database (https://www.genecards.org/ ), and the OMIM database (https://omim.org/ ).
Construction of Visual Network
The screened predicted targets were imported into the protein interaction analysis
platform STRING 11.0 (https://version-11-0.string-db.org/ ). A “components-targets” network was established through Cytoscope 3.9.1 between
the compound molecules and target proteins of CWD. In the network, the associations
between nodes of components and targets were depicted by edges. The “degree” was used
to calculate the edges linked to each node, which indicated the significance of the
nodes in the network.
Gene Ontology Analysis and Pathway Enrichment (KEGG and Reactome) Analysis
Overlapping drug targets and diseases were imported into the DAVID (Database for Annotation,
Visualization, and Integrated Discovery) web server (https://david.ncifcrf.gov/ ) and OmicShare Cloud Platform (https://www.omicshare.com/ ) for gene ontology (GO) biological processes and KEGG (Kyoto encyclopedia of genes
and genomes) pathway enrichment analysis. The Metascape Platform (http://metascape.org/gp/index.html ) was used for Reactome analysis, to explain the results of high-throughput genomics
research.
Molecular Docking
The molecule structure (Mol2 structure) of the active compounds in CWD was downloaded
from PubChem (https://pubchem.ncbi.nlm.nih.gov/ ). The 3D structure of the core protein targets was extracted from the Protein Data
Bank (https://www1.rcsb.org/ ). Molecular docking and calculation of the binding affinity were performed using
AutoDock (https://ccsb.scripps.edu/projects/ ).
Results and Discussion
The Analysis of UPLC-Q-TOF-MS and GC-MS
Components Determined by UPLC-Q-TOF-MS
A total of 194 components were identified from the samples of CWD by UPLC-Q-TOF-MS,
including 71 terpenes, 37 flavonoids, 11 steroids, 11 phenylpropanoids, 8 alkaloids,
11 aromatics, 8 organic acids, 13 alcohols and esters, 6 simple ketones and aldehydes,
and 18 other compounds. The retention time, excimer ion peak, molecular formula, herb
source (in abbreviation), and other information are shown in [Table 2 ]. The ion flow diagram corresponding to peaks 1 to 194 is shown in [Fig. 1 ].
Fig. 1 Total ion flow diagram of CWD components in (A ) positive ion mode and (B ) negative ion mode of UPLC-Q-TOF-MS. CWD, Chushi Weiling Decoction.
Table 2
Analysis and identification of components from CWD by UPLC-Q-TOF-MS
Compd.
Component name
Neutral mass (Da)
Observed m/z
Mass error (mDa)
Mass error (ppm)
Observed RT (min)
Adducts
Fragment ions (m/z , ESI− /ESI+ )
Formula
Herb-source (in Abbreviation[a ])
Ref.
1
3-Indole carboxylic acid
161.0477
162.0546
−0.3
−2.0
0.64
[M + H]+
162.1524, 131.1723
C9 H7 NO2
GC
[36 ]
2
Dehydroeffusal
252.0786
253.0848
−1.1
−4.3
0.66
[M + H]+
253.1445, 203.1294
C16 H12 O3
DXC
[40 ]
3
Butenolide B
234.1256
235.1312
−1.6
−6.9
0.66
[M + H]+
235.0317, 234.1720, 219.0972, 157.1694
C14 H18 O3
CZ
[19 ]
4
5,7,3′-Trimethoxyl-(−)-epicatechin
332.1260
333.1335
0.2
0.7
0.67
[M + H]+
333.1335, 265.1961, 175.1598
C18 H20 O6
ZZ
[28 ]
[29 ]
5
Naringin[b ]
580.1792
581.1889
2.5
4.2
0.67
[M + H]+
581.1134, 461.0730, 417.1751
C27 H32 O14
CP
[35 ]
6
Quercitrin
448.1006
449.1108
3.0
6.6
0.67
[M + H]+
449.1108, 303.9655, 285.0639, 275.1771, 180.9662, 165.1959, 127.1546, 109.0404
C21 H20 O11
ZZ
[28 ]
[29 ]
7
(+)-Syringaresinol
418.1628
419.1694
−0.7
−1.6
0.68
[M + H]+
419.2348
C22 H26 O8
RG, HP
[31 ]
[32 ]
8
Genipin-1-O- gentiobioside
550.1898
549.1810
−1.5
−2.8
0.69
[M − H]−
549.1810, 387.1237, 371.0946, 225.0650, 123.0331
C23 H34 O15
ZZ
[28 ]
[29 ]
9
Picrasmalignan A
534.1890
533.1850
3.3
6.3
0.70
[M - H]−
533.1850, 403.1144
C30 H30 O9
RG
[31 ]
10
Liriodenine
275.0582
276.0640
−1.6
−5.6
0.72
[M + H]+
276.0640
C17 H9 NO3
HP
[32 ]
11
N-Methylisosalsoline
207.1259
208.1327
−0.5
−2.3
0.73
[M + H]+
208.1327
C12 H17 NO2
HP
[32 ]
12
2-Hydroxyisoxypropyl-3-hydroxy-7-isopentene-2,3-dihydrobenzofuran-5-carboxylic
306.1467
307.1526
−1.4
−4.5
0.76
[M + H]+
307.1526, 291.1987, 263.2010
C17 H22 O5
CZ
[19 ]
13
Aristolochic acid A
340.0583
341.0635
−2.1
−6.1
0.77
[M + H]+
341.0635, 313.1517
C17 H11 NO7
MT
[21 ]
[22 ]
14
Cassiferaldehyde
178.0630
179.0694
−0.9
−5.1
0.77
[M + H]+
179.0694, 163.9995, 145.1784
C10 H10 O3
RG
[31 ]
15
Gardenoside_qt[b ]
242.1154
243.1217
−1.0
−4.1
0.77
[M + H]+
243.0620
C12 H18 O5
ZZ
[28 ]
[29 ]
16
Genipin
226.0841
227.0916
0.2
1.1
0.78
[M + H]+
227.0916
C11 H14 O5
ZZ
[28 ]
[29 ]
17
Erthro-guaiacy lglycerol
214.0841
215.0927
1.3
5.9
0.82
[M + H]+
215.0927, 151.1683
C10 H14 O5
RG
[31 ]
18
5′-Methoxylariciresinol
390.1679
391.1759
0.7
1.9
0.84
[M + H]+
391.1759, 353.1975, 289.0502
C21 H26 O7
RG
[31 ]
19
Sinapaldehyde 4-O- β-D- glucopyranoside
370.1264
371.1339
0.2
0.6
0.91
[M + H]+
371.1339, 197.0718
C17 H22 O9
HP
[32 ]
20
Magnoloside R
478.1686
479.1780
2.1
4.4
0.92
[M + H]+
479.1780, 457.2520, 441.1270
C20 H30 O13
HP
[32 ]
21
3-(3,4-Dimethoxyphenyl)-2-propenal
192.0786
193.0847
−1.2
−6.3
0.96
[M + H]+
193.0847, 175.1160, 149.1337
C11 H12 O3
RG
[31 ]
22
Sulfoorientalol C
300.1395
301.1455
−1.3
−4.5
1.07
[M + H]+
301.1455, 243.0157
C15 H24 O4 S
ZX
[27 ]
23
Licorice glycoside A
726.2160
727.2266
3.4
4.6
1.50
[M + H]+
727.2266, 711.1833, 527.1888
C36 H38 O16
GC
[36 ]
24
11-Hydroxy-sec-O- β-D- glucosylhamaudol
472.1581
473.1638
−1.5
−3.2
1.59
[M + H]+
473.1638, 429.1854, 297.3093
C21 H28 O12
FF
[37 ]
25
Gancaonin Q
406.1780
407.1821
−3.2
−7.9
1.72
[M + H]+
407.1821, 385.2041, 305.3676
C25 H26 O5
GC
[36 ]
26
Prim-O- glucosylcimifugin[b ]
468.1737
469.1790
−2.0
−4.2
1.75
[M + H]+
469.1790, 443.1633, 415.1733, 385.2041
C22 H28 O11
FF
[37 ]
27
8β-Methoxyatractylenolide I
262.1569
263.1629
−1.3
−4.8
1.92
[M + H]+
263.1629, 199.1105
C16 H22 O3
CZ, BZ
[19 ]
[20 ]
28
Cinncassiol A
381.1913
382.2007
2.1
5.4
2.21
[M + H]+
381.1721, 339.1682, 325.1788
C20 H30 O7
RG
[31 ]
29
Anomalin
426.1679
427.1717
−3.4
−8.1
2.35
[M + H]+
427.1710, 263.1408, 245.0156, 217.0547
C24 H26 O7
FF
[38 ]
30
Epianhydrocinnzeylanol
366.2042
367.2080
−3.5
−9.5
2.43
[M + H]+
367.2080, 349.2000, 305.2243
C20 H30 O6
RG
[31 ]
31
(2S )-2-[4-Hydroxy-3-(3-methylbut-2-enyl)phenyl]-8,8-dimethyl-2,3-dihydropyrano[2,3-f]chromen-4-one
390.1831
391.1897
−0.6
−1.6
2.49
[M + H]+
391.1897, 369.2114
C25 H26 O4
GC
[36 ]
32
Isochlorogenic acid A[b ]
516.1268
515.1217
2.2
4.3
2.49
[M − H]−
515.1217, 497.1316
C25 H24 O12
ZZ
[28 ]
[29 ]
33
Deacetylasperulosidic acid methyl ester
404.1319
403.1231
−1.5
−3.6
2.50
[M − H]−
403.1231
C17 H24 O11
ZZ
[28 ]
[29 ]
34
Tembetarine
344.1862
345.1925
−1.0
−2.8
2.81
[M + H]+
642.1540, 619.1677, 589.1520
C20 H26 NO4
+
HP
[32 ]
35
Fangfengalpyrimidine
296.1372
297.1444
−0.1
−0.4
2.95
[M + H]+
297.1444, 281.1784, 211.1701
C14 H20 O5 N2
FF
[37 ]
36
Glycyrin
382.1416
383.1472
−1.7
−4.6
3.06
[M + H]+
383.1472, 309.1640, 265.1397
C22 H22 O6
GC
[36 ]
37
Magnoligan H
562.2355
561.2280
−0.3
−0.5
3.11
[M − H]−
561.2280, 519.9194, 475.0555
C36 H34 O6
HP
[32 ]
38
Paeonolide
460.1581
461.1668
1.5
3.1
3.17
[M + H]+
460.9483, 297.1050, 167.1323, 137.1349
C20 H28 O12
CZ
[19 ]
39
(4E ,6E ,12E )-4,6,12-Tetradecatriene-8,10-diyne-1,3,14-triol
232.1099
233.1169
−0.4
−1.5
3.26
[M + H]+
233.0911, 215.0813, 193.1007, 91.1242
C14 H16 O3
BZ
[20 ]
40
Nobiletin
402.1315
403.1381
−0.6
−1.5
3.45
[M + H]+
413.1381, 317.1877, 301.2659
C21 H22 O8
CP
[35 ]
41
Neocnidilide
194.1307
195.1392
1.3
6.6
3.50
[M + H]+
195.1392, 177.1313
C12 H18 O2
FF
[38 ]
42
1-Methoxyficifolinol
422.2093
423.2130
−3.6
−8.5
3.93
[M + H]+
423.2130, 365.1625
C26 H30 O5
GC
[36 ]
43
1,1'-Dibenzene-6',8',9'-trihydroxy-3-allyl-4-O- β-D- glucopyranoside
462.1890
463.2001
3.9
8.4
3.96
[M + H]+
463.2001, 293.1686, 241.1755
C24 H30 O9
HP
[32 ]
44
[(3R )-3,7-Dimethyloct-6-enyl] butanoate
226.1933
227.2000
−0.6
−2.7
4.31
[M + H]+
227.0265, 143.0355
C14 H26 O2
CP
[35 ]
45
Atractyloyne
314.1882
315.1982
2.7
8.6
4.38
[M + H]+
315.1982, 261.1326
C19 H24 O4
CZ
[19 ]
46
β-Hydroxyacteoside
640.2003
639.1923
−0.7
−1.2
4.51
[M − H]−
639.1923, 595.2032
C29 H36 O16
HP
[32 ]
47
Paeonioflorin
482.1788
483.1859
−0.2
−0.3
4.52
[M + H]+
483.1859, 397.2006, 343.2326
C23 H30 O11
CZ
[19 ]
48
Orientanone
348.1065
349.1138
0.0
0.1
4.60
[M + H]+
349.1138, 297.4816
C15 H24 O5 S2
ZX
[27 ]
49
10-epi-Atractyloside A
448.2309
449.2390
0.9
2.0
4.68
[M + H]+
449.2390, 403.2103, 297.3092
C21 H36 O10
CZ
[19 ]
50
Kanzonol Y
410.2093
411.2162
−0.4
−0.9
4.70
[M + H]+
411.2162, 395.1499, 297.3092
C25 H30 O5
GC
[36 ]
51
Atractylenolide III
248.1412
249.1469
−1.7
−6.7
4.81
[M + H]+
249.1469, 223.1396
C15 H20 O3
CZ, BZ
[19 ]
[20 ]
52
Gardenone
226.1569
227.1648
0.6
2.7
5.51
[M + H]+
227.1648, 209.1573, 191.1473, 177.1319
C12 H20 O3
ZZ
[28 ]
[29 ]
53
(+)-Dehydrovomifoliol
222.1256
223.1333
0.4
1.9
5.51
[M + H]+
223.1333, 209.1573, 191.1473, 177.1319, 149.1367
C13 H18 O3
HP
[32 ]
54
Vitexin
432.1057
433.1114
−1.5
−3.5
5.51
[M + H]+
433.1114, 281.0650
C21 H20 O10
GC
[36 ]
55
Calceolarioside B[b ]
478.1475
479.1549
0.2
0.3
5.51
[M + H]+
479.1550, 411.1791
C23 H26 O11
MT
[21 ]
[22 ]
56
(E )-3-(3-Methoxyphenyl)acrylaldehyde
162.0681
163.0749
−0.4
−2.5
5.67
[M + H]+
163.0750, 143.0357, 127.0617
C10 H10 O2
RG
[31 ]
57
(± )-9-Hydroxy-10E ,12Z -octadecadienoic acid
296.2351
297.2406
−1.8
−6.2
5.84
[M + H]+
297.2406, 269.1846, 211.1473, 146.1472
C18 H32 O3
HP
[32 ]
58
Oxypaeoniflorin
496.1581
497.1629
−2.4
−4.9
6.18
[M + H]+
497.1629, 425.1340
C23 H28 O12
CZ
[19 ]
59
Methyl 3,4,5-trimethoxycinnamate
252.0998
251.0949
2.4
9.4
6.88
[M − H]−
251.0949, 229.1132, 183.1062
C13 H16 O5
CZ
[19 ]
60
Gancaonin T
398.2093
399.2145
−2.1
−5.3
7.03
[M + H]+
399.2145, 297.3094
C24 H30 O5
GC
[36 ]
61
Pachyman
500.2105
501.2156
−2.2
−4.3
7.24
[M + H]+
501.2156, 485.2381, 439.2048
C20 H30 O14
FL
[24 ]
62
Coniferin
342.1315
343.1411
2.3
6.8
7.2
[M + H]+
343.1411, 185.1562
C16 H22 O8
HP
[32 ]
63
Albiflorin
480.1632
481.1725
2.1
4.3
7.49
[M + H]+
481.1725, 467.1944, 413.1339
C23 H28 O11
CZ
[19 ]
64
Euchrenone
406.2144
407.2199
−1.8
−4.4
8.1
[M + H]+
407.2199, 355.2335, 301.1431, 203.2675
C25 H26 O5
GC
[36 ]
65
Xambioona
388.1675
389.1761
1.4
3.5
8.85
[M + H]+
389.1761, 341.2324, 211.1702
C25 H24 O4
GC
[36 ]
66
Houpulin H
436.2614
437.2673
−1.3
−3.0
9.22
[M + H]+
427.2306, 355.2334
C28 H36 O4
HP
[32 ]
67
Magnoflorine
342.1705
342.1773
−2.1
−6.3
9.68
[M]+
342.1773, 311.2000, 297.2154, 237.2061
C20 H24 NO4
+
HP
[32 ]
68
(S)-Falcarinol
244.1827
245.1906
0.6
2.4
9.69
[M + H]+
245.1906, 221.1561, 203.1452
C17 H24 O
FF
[38 ]
69
Gancaonin R
382.2144
383.2219
0.2
0.5
9.75
[M + H]+
383.2219, 307.2192, 185.1916
C24 H30 O4
GC
[36 ]
70
Houpulin C
398.1882
399.1950
−0.5
−1.2
9.97
[M + H]+
399.1950, 373.1039, 331.1639
C27 H26 O3
HP
[32 ]
71
(4aS ,6aR ,6aS ,6bR ,8aR ,12aS ,14bS )-2,2,6a,6b,9,9,12a-Heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic
acid
440.3654
441.3723
−0.4
−1.0
10.02
[M + H]+
441.1637, 419.1830
C30 H48 O2
MT
[21 ]
[22 ]
72
Kanzonols X
394.2144
395.2200
−1.6
−4.2
10.34
[M + H]+
395.2200, 331.2170, 277.2113
C25 H30 O4
GC
[36 ]
73
Galloylpaeoniflorin
632.1741
633.1791
−2.3
−3.6
10.71
[M + H]+
633.1526, 611.1441, 529.2185, 477.1998
C30 H32 O15
CZ
[19 ]
74
Glyasperin A
422.1729
423.1781
−2.1
−4.9
10.72
[M + H]+
423.1781, 381.2039
C25 H26 O6
GC
[36 ]
75
Gancaonin H
420.1573
421.1615
−3.1
−7.4
10.88
[M + H]+
421.1615, 311.2493, 207.1408
C25 H24 O6
GC
[36 ]
76
(−)-Epicatechin-3-O- β-glucoside
464.1683
465.1780
2.5
5.4
11.35
[M + H]+
465.1780, 439.2774, 297.3092, 283.2953
C22 H24 O11
RG
[31 ]
77
Houpulin K
546.2406
547.2520
4.1
7.5
11.71
[M + H]+
403.2643, 385.2346, 339.2209
C36 H34 O5
HP
[32 ]
78
Blumenol A
224.1412
225.1495
1.0
4.4
11.94
[M + H]+
225.1495, 207.1414, 175.1156
C13 H20 O3
HP
[32 ]
79
3,5-Dimethoxy-4-glucosyloxyphenylallylalcohol_qt
210.0892
209.0835
1.5
7.3
12.05
[M − H]−
209.0835, 187.1010
C11 H14 O4
CZ
[19 ]
80
(+)-Leptolepisol C
498.1890
497.1770
−4.7
−9.4
12.57
[M − H]−
497.1770, 469.9197, 401.9299, 249.9649
C27 H30 O9
RG
[31 ]
81
Atractylenolide I
230.1307
231.1388
0.8
3.5
12.57
[M + H]+
231.1388, 215.1578, 189.1274, 177.1311, 145.1406
C15 H18 O2
CZ, BZ
[19 ]
[20 ]
82
Isoschaftoside
564.1479
565.1540
−1.2
−2.2
12.82
[M + H]+
565.1540, 527.2766, 429.2011
C26 H28 O14
GC
[36 ]
83
(−)-Medicocarpin
432.1420
433.1498
0.5
1.1
13.09
[M + H]+
433.1498, 347.1408, 291.2258, 271.1308, 183.1919
C22 H24 O9
GC
[36 ]
84
Lactiflorin
462.1526
461.1465
1.2
2.6
13.64
[M − H]−
461.1638, 447.1721, 381.1842
C23 H26 O10
CZ
[19 ]
85
Poricoic acid A
498.3345
499.3412
−0.6
−1.2
15.05
[M + H]+
499.3412
C31 H46 O5
FL
[24 ]
86
Leonoside A
770.2633
771.2675
−3.1
−4.0
15.10
[M + H]+
771.2675, 745.2080
C35 H46 O19
HP
[32 ]
87
Cinnacasiol H
382.1992
383.2042
−2.3
−5.9
15.24
[M + H]+
383.2042, 335.1576, 275.2368
C20 H30 O7
RG
[31 ]
88
Decyl acetate
200.1776
201.1849
0.0
0.2
15.50
[M + H]+
201.1850, 187.1868
C12 H24 O2
FF
[37 ]
89
Magnoloside Y
626.2211
627.2296
1.2
2.0
16.77
[M + H]+
627.2296, 583.2188
C30 H26 O15
HP
[32 ]
90
2-Tetradecanone
212.2140
213.2227
1.4
6.7
17.41
[M + H]+
213.2227
C14 H28 O
GC
[36 ]
91
Poricoic acid C
482.3396
483.3489
2.0
4.2
17.59
[M + H]+
483.3489, 431.9511
C31 H46 O4
FL
[24 ]
92
8β-Ethoxy atractylenolide III
276.1725
277.1776
−2.2
−8.1
17.75
[M + H]+
277.1776, 259.1688, 205.1256
C18 H28 O2
CZ, BZ
[19 ]
[20 ]
93
Dehydroabietic acid
300.2089
301.2173
1.0
3.5
18.33
[M + H]+
301.2173, 269.1532
C20 H28 O2
FL
[24 ]
94
Geniposide[b ]
388.1370
389.1425
−1.8
−4.5
21.77
[M + H]+
389.1425, 365.1651
C17 H24 O10
ZZ
[28 ]
[29 ]
95
Paeonin
660.1457
661.1529
−0.1
−0.2
21.78
[M + H]+
661.1529, 645.1854, 603.1822
C28 H33 ClO16
CZ
[19 ]
96
Magnoloside P
774.2582
775.2691
3.6
4.6
22.09
[M + H]+
775.7674, 757.3918
C34 H46 O20
HP
[32 ]
97
(−)-15-Hydroxy-T-muurolol
218.1671
219.1734
−1.0
−4.5
22.53
[M + H]+
219.1663, 207.1403, 147.1930, 123.1908
C15 H22 O
RG
[31 ]
98
Crocin I[b ]
976.3788
977.3900
4.
4.1
22.57
[M + H]+
977.3900, 831.3745, 655.3856
C44 H64 O24
ZZ
[28 ]
[29 ]
99
Dehydrotumulosic acid
484.3553
485.3640
1.4
3.0
23.01
[M + H]+
485.3640, 467.3574, 447.9464, 271.1655
C31 H48 O4
FL
[24 ]
100
Croceic acid
328.1675
327.1611
0.9
2.8
23.32
[M − H]−
327.1611, 309.1694
C20 H24 O4
ZZ
[28 ]
[29 ]
101
(−)-Myrtenal
150.1045
151.1117
0.0
0.0
23.49
[M + H]+
151.1117, 121.1606
C10 H14 O
HP
[32 ]
102
Poricoic acid CE
510.3709
511.3764
−1.8
−3.6
23.55
[M + H]+
511.3764, 451.3655, 397.0895, 375.1113
C33 H50 O4
FL
[24 ]
103
Icariside F2
402.1526
403.1564
−3.5
−8.7
24.00
[M + H]+
403.1564, 315.1757
C18 H26 O10
CZ, BZ
[19 ]
[20 ]
104
3-(2-Hydroxyacetoxy)-5α,8α-peroxydehydro-tumulosic acid
572.3349
573.3462
4.0
6.9
24.12
[M + H]+
573.3462, 555.1128, 469.1532
C33 H48 O8
FL
[24 ]
105
24-Methylene-3-oxolanost-8-en-21-oic acid
468.3604
469.3699
2.2
4.8
24.13
[M + H]+
469.1532, 429.1674
C31 H48 O3
FL
[24 ]
106
(−)-Epoxycaryophyllene
220.1827
221.1895
−0.5
−2.1
24.21
[M + H]+
221.1895, 191.0765
C15 H24 O
HP
[32 ]
107
Cinnamoid E
234.1620
235.1692
−0.1
−0.4
24.29
[M + H]+
235.1692, 185.1523
C15 H22 O2
RG
[31 ]
108
β-Eudesmol
224.2140
225.2226
1.3
6.0
24.40
[M + H]+
225.2226, 199.0994
C15 H28 O
CZ, BZ, HP, FF
[19 ]
[20 ]
[32 ]
[38 ]
109
23-O- Methylalisol A
504.3815
505.3870
−1.8
−3.5
24.42
[M + H]+
505.3870, 487.3789, 469.3716
C31 H52 O5
ZX
[27 ]
110
5-O- Methylvisamminol[b ]
290.1154
289.1097
1.6
5.4
24.55
[M − H]−
289.1097, 243.1042, 221.1214
C16 H18 O5
FF
[37 ]
111
Geranylacetone
194.1671
195.1763
1.9
9.8
24.60
[M + H]+
195.1734, 179.2052
C13 H22 O
FF
[38 ]
112
Tumulosic acid
486.3709
487.3803
2.1
4.4
24.66
[M + H]+
487.3803, 469.3732
C31 H50 O4
FL
[24 ]
113
Shanzhiside
392.1319
393.1405
1.4
3.5
24.79
[M + H]+
393.1405, 225.0653
C16 H24 O11
ZZ
[28 ]
[29 ]
114
Eudesma-4(14)-en-1,6-diol
240.2089
241.2153
−0.9
−3.8
26.27
[M + H]+
241.2153, 197.2770
C15 H28 O2
BZ
[20 ]
115
Kanzonol H
424.2250
425.2340
1.8
4.1
26.41
[M + H]+
425.2282, 371.2043
C26 H32 O5
GC
[36 ]
116
Syringin
372.1420
373.1502
0.9
2.4
27.12
[M + H]+
373.1502, 357.1291
C17 H24 O9
CZ
[19 ]
117
Undecyl acetate
214.1933
215.2013
0.8
3.7
27.26
[M + H]+
215.2014, 159.1566
C13 H26 O2
FL
[24 ]
118
2,5,5-Trimethylhepta-1,6-diene
138.1409
139.1489
0.7
5.2
27.45
[M + H]+
139.1489, 103.1270
C10 H18
CP
[35 ]
119
4-Keto-Magnoflorine
356.1498
357.1576
0.5
1.4
27.71
[M + H]+
357.1576, 343.3559
C20 H22 NO5
+
HP
[32 ]
120
16-Deoxyporicoic acid B
468.3240
469.3291
−2.1
−4.5
27.87
[M + H]+
469.3291, 365.1646, 259.2386
C30 H44 O4
FL
[24 ]
121
(22E )-Ergosta-7,22 -dien-3β,5α,6β-ol
430.3447
431.3530
1.0
2.4
28.00
[M + H]+
431.3530, 413.1703, 387.2134, 343.1938
C28 H46 O3
FL, ZL
[24 ]
[26 ]
122
Cedrol
222.1984
223.2059
0.2
1.0
28.12
[M + H]+
223.2059, 197.1910
C15 H28 O
CZ
[19 ]
123
Cinnamoid D
236.1776
237.1842
−0.7
−2.9
28.16
[M + H]+
237.2576, 219.1752, 165.0047
C15 H24 O2
RG
[31 ]
124
Glyasperin D
370.1780
371.1829
−2.4
−6.5
28.17
[M + H]+
371.1829
C22 H26 O5
GC
[36 ]
125
Asperuloside_qt
252.0634
253.0694
−1.2
−4.9
28.25
[M + H]+
253.0694, 225.9753
C12 H12 O6
ZZ
[28 ]
[29 ]
126
Magnocurarine
314.1756
315.1817
−1.2
−3.7
28.97
[M + H]+
315.1817
C19 H24 NO3
+
HP
[32 ]
127
(2R )-2-[3,4-Dihydroxy-5-(3-methylbut-2-enyl)phenyl]-5,7-dihydroxy-8-(3-methylbut-2-enyl)chroman-4-one
424.1886
425.1949
−0.9
−2.2
29.57
[M + H]+
425.1949, 409.2286, 355.2137, 299.2554
C25 H28 O6
GC
[36 ]
128
15-Hydroxy-7-oxoabieta-8,11,13-trien-18-oic acid
330.1831
331.1916
1.2
3.7
29.57
[M + H]+
331.1916, 299.2554
C20 H26 O4
FL
[24 ]
129
10-O- Methyl-alismoxide
252.2089
253.214
−1.5
−5.8
29.85
[M + H]+
253.2147, 179.2194
C16 H28 O2
ZX
[27 ]
130
Houpulin F
420.2665
421.2731
−0.7
−1.6
30.44
[M + H]+
421.2731, 341.3293, 271.3299
C28 H36 O3
HP
[32 ]
131
Dauricine
624.3199
625.3290
1.8
2.9
30.85
[M + H]+
625.3290, 205.2191, 189.1632, 161.1524
C38 H44 N2 O6
MT
[21 ]
[22 ]
132
16-Oxo-alisol A
504.3451
505.3518
−0.6
−1.1
30.88
[M + H]+
505.3518, 483.1921, 467.2456
C30 H48 O6
ZX
[27 ]
133
Caryolane-1,9β-diol
238.1933
239.2011
0.5
2.2
31.07
[M + H]+
239.2011, 193.1995
C15 H26 O2
RG
[31 ]
134
Houpulin J
402.2559
403.2641
1.0
2.4
31.51
[M + H]+
403.2641, 385.2346, 371.2216, 355.3386, 337.3595
C28 H34 O2
HP
[32 ]
135
Cinncassiol D1
352.2250
353.2333
1.0
2.9
32.02
[M + H]+
353.2333, 335.3303
C20 H32 O5
RG
[31 ]
136
Akebonic acid
440.3291
441.3379
1.5
3.5
33.10
[M + H]+
441.3379, 409.2314
C29 H44 O3
MT
[21 ]
[22 ]
137
Poricoic acid D
514.3294
513.3193
−2.9
−5.6
33.33
[M − H]−
513.3193
C32 H48 O7
FL
[24 ]
138
Ergosta-7-en-3,5,6-triol
432.3604
433.3671
−0.5
−1.2
33.51
[M + H]+
433.3671, 417.3971, 313.2673
C28 H48 O3
ZL
[26 ]
139
Uralsaponin B
822.4038
823.4070
−4.0
−4.9
33.67
[M + H]+
803.4070, 779.3923, 765.5055
C42 H62 O16
GC
[36 ]
140
Kanzonols L
490.2355
491.2425
−0.3
−0.7
33.75
[M + H]+
491.2425, 475.2702, 327.1432
C30 H34 O6
GC
[36 ]
141
Cinncassiol D4-2-O- monoacetate
366.2406
367.2471
−0.8
−2.3
33.88
[M + H]+
367.2471, 319.3628
C21 H34 O5
RG
[31 ]
142
Hydroxytetracosanoic acid
384.3604
385.3677
0.1
0.2
34.33
[M + H]+
385.3677, 299.2268
C24 H48 O3
ZL
[26 ]
143
Cinncassiol D3
368.2199
369.2283
1.1
2.9
34.37
[M + H]+
369.2283, 319.1751
C20 H32 O6
RG
[31 ]
144
(22E )-Ergosta-6,8(14),22-trien-3β-ol
396.3392
397.3451
−1.4
−3.6
34.61
[M + H]+
397.3451, 381.3475, 365.3563, 279.1637
C28 H44 O
FL
[24 ]
145
2-Lauroleic acid
198.1620
199.1701
0.8
4.2
35.10
[M + H]+
199.1701, 185.1708, 161.1730
C12 H22 O2
FL
[24 ]
146
Poricoic acid DM
528.3451
529.3472
−5.2
−9.8
35.42
[M + H]+
529.3472
C32 H48 O6
FL
[24 ]
147
Poricoic acid B
484.3189
485.3290
2.8
5.9
35.56
[M + H]+
485.3290, 467.3383, 411.1554, 325.2855
C30 H44 O5
FL
[24 ]
148
(22E )-Er-gosta-5,7,9(11),22 -tetraen-3β-ol
394.3236
395.3306
−0.3
−0.7
35.61
[M + H]+
395.3306, 327.3144, 305.2249
C28 H42 O
FL
[24 ]
149
Oleanolic acid-28-O- beta-D- glucopyranoside
618.4132
619.4167
−3.8
−6.1
35.75
[M + H]+
619.4167, 535.3676, 475.3616
C36 H58 O8
HP
[32 ]
150
Alisol A 23,24-diacetate
574.3870
575.3991
4.9
8.5
35.85
[M + H]+
575.3984, 553.3695, 493.3624
C34 H54 O7
ZX
[27 ]
151
Crepenynic acid
278.2246
279.2295
−2.3
−8.3
35.92
[M + H]+
279.2296, 237.2577
C18 H30 O2
BZ
[20 ]
152
Citromitin
404.1471
403.1393
−0.5
−1.3
36.64
[M − H]−
403.1393
C20 H20 O7
CP
[35 ]
153
Polyporusterone F
462.3345
463.3445
2.7
5.8
36.68
[M + H]+
463.3445, 413.3189, 319.2897
C28 H46 O5
ZL
[26 ]
154
11,25-Anhydroalisol F
452.3291
453.3365
0.2
0.5
36.90
[M + H]+
453.3365, 429.3682, 413.2441, 302.3736
C30 H44 O3
ZX
[27 ]
155
Daedaleanic acid B
488.3502
489.3558
−1.6
−3.4
37.76
[M + H]+
489.3558, 473.3861, 341.3287
C30 H48 O5
FL
[24 ]
156
24-Hydroxy-11-deoxyglycyrrhetic acid
458.3396
459.3494
2.5
5.5
37.81
[M + H]+
459.3494, 421.3847
C29 H46 O4
GC
[36 ]
157
Alisol J 23-acetate
526.3294
527.3362
−0.5
−1.0
38.10
[M + H]+
527.3362, 487.3979, 475.3038
C32 H46 O6
ZX
[27 ]
158
Stigmasterol 3-O- beta-D- glucopyranoside
574.4233
575.4328
2.2
3.8
38.56
[M + H]+
575.4328, 545.4279, 537.3829, 343.2842
C35 H58 O6
CZ
[19 ]
159
16,23-Oxido-alisol B
470.3396
471.3465
−0.4
−0.8
39.07
[M + H]+
471.3456, 399.3606
C30 H46 O4
ZX
[27 ]
160
26-Hydroxyporicoic acid DM
544.3400
545.3496
2.3
4.3
39.08
[M + H]+
545.3496, 499.3533, 461.3603
C32 H48 O7
FL
[24 ]
161
Alisol B diacetate
556.3764
557.3873
3.6
6.5
39.51
[M + H]+
557.3918, 531.4154
C34 H52 O6
ZX
[27 ]
162
Stigmast-4-ene-3,6-dione
426.3498
427.3558
−1.3
−2.9
39.56
[M + H]+
429.3558, 349.3443, 299.3168
C29 H46 O2
ZZ
[28 ]
[29 ]
163
(22E )-Ergosta-7,22 -dien-3β-ol
398.3549
399.3621
0.0
0.0
40.24
[M + H]+
399.3621, 345.3486, 301.3576
C28 H46 O
FL, ZL
[24 ]
[25 ]
164
Glyasperin E
444.1573
445.1657
1.1
2.5
40.40
[M + H]+
445.1657, 429.3067, 301.2096
C27 H24 O6
GC
[36 ]
165
Polyporoid C
494.3244
495.3276
−4.0
−8.1
40.99
[M + H]+
495.3276, 439.3856
C28 H46 O7
ZL
[26 ]
166
3β-Hydroxystigmasta-5,22-dien-7-one
424.3341
425.3378
−3.6
−8.5
41.79
[M + H]+
425.3378, 399.4010, 257.2334
C29 H44 O2
HP
[32 ]
167
Stigmasterol
412.3705
413.3751
−2.7
−6.6
42.15
[M + H]+
413.3751, 399.3317, 313.2665
C29 H48 O
MT, ZZ
[21 ]
[22 ]
[28 ]
[29 ]
168
Hesperidin[b ]
610.1898
611.1940
−3.1
−5.0
42.17
[M + H]+
611.1940, 441.3571, 297.3090
C28 H34 O15
CP
[35 ]
169
Heptadecane
240.2817
241.2897
0.7
3.0
42.38
[M + H]+
241.2897
C17 H36
BZ
[20 ]
170
Polyporusterone A
478.3294
479.3336
−3.1
−6.5
42.87
[M + H]+
479.3336, 441.3643
C28 H46 O6
ZL
[25 ]
[26 ]
171
4,22-Stigmastadiene-3-one
410.3549
411.3608
−1.4
−3.3
43.49
[M + H]+
411.3608, 387.3042, 297.3090
C29 H46 O
HP
[32 ]
172
3α-Pachymic acid
528.3815
529.3891
0.3
0.6
43.51
[M + H]+
529.3891, 485.3752, 441.3631
C33 H52 O5
FL
[24 ]
173
Poricoic acid ZG
502.3294
503.3363
−0.4
−0.8
43.81
[M + H]+
503.3363, 419.3841
C30 H46 O6
FL
[24 ]
174
11-Deoxy 13,17-epoxy-alisol A
490.3658
491.3706
−2.5
−5.0
43.82
[M + H]+
491.3707, 463.3458, 439.2510, 333.1403
C30 H50 O5
ZX
[27 ]
175
Eburicoic acid
470.3760
471.3858
2.5
5.4
44.19
[M + H]+
471.3858, 447.4211, 433.2019
C31 H50 O3
FL
[24 ]
176
Cinnacaslol glucoside
544.2520
545.2608
1.6
2.9
44.42
[M + H]+
545.2608, 523.5031, 441.3846
C26 H40 O12
RG
[31 ]
177
13,17-Epoxy-alisol A
506.3607
507.3688
0.8
1.5
44.65
[M + H]+
507.3688, 493.3894, 365.4323, 283.2955
C30 H50 O6
ZX
[27 ]
178
Kaempferol[b ]
286.0477
287.0556
0.6
2.2
44.82
[M + H]+
287.0557, 269.9386
C15 H10 O6
ZZ
[28 ]
[29 ]
179
25-O- Ethylalisol A
518.3971
519.4084
4.0
7.7
44.85
[M + H]+
519.4084, 467.4148
C32 H54 O5
ZX
[27 ]
180
Oplopanane
192.1878
193.1960
0.9
4.5
45.02
[M + H]+
193.2343, 177.2408
C14 H24
HP
[32 ]
181
beta-Sitosterol-3-O- β-D- xylopyranoside
546.4284
547.4303
−5.4
−9.9
45.05
[M + H]+
547.4303, 519.3270, 505.3836
C34 H58 O5
MT
[21 ]
[22 ]
182
(4E ,6E ,12E )-Tetradecatriene-8,10-diyne-1,3-diyl diacetate
300.1362
301.1437
0.2
0.8
45.82
[M + H]+
301.1437, 261.2044, 217.1814, 173.1560
C18 H20 O4
BZ
[20 ]
183
8-Methylheptadecane
254.2974
255.3038
−0.
−3.4
45.98
[M + H]+
255.3051, 241.1753
C18 H38
RG
[31 ]
184
2,4-Di-t -butylphenol
206.1671
207.1749
0.6
2.8
45.99
[M + H]+
207.1749, 189.0352, 147.0085
C14 H22 O
CP
[35 ]
185
5-Allyl-5′-(1″-hydroxyallyloxy)biphenyl-2,2'-diol
298.1205
299.1284
0.6
1.9
46.00
[M + H]+
297.3135, 283.2956, 255.2339
C18 H18 O4
HP
[32 ]
186
Squalene
410.3913
411.4005
2.0
4.9
46.00
[M + H]+
411.3562
C30 H50
ZZ
[28 ]
[29 ]
187
Myristic acid
228.2089
229.2164
0.2
1.0
46.00
[M + H]+
229.2164, 215.2060, 201.1866
C14 H28 O2
ZZ
[28 ]
[29 ]
188
Palmitoleic acid
254.2246
255.2304
−1.5
−5.8
46.00
[M + H]+
255.2304
C16 H30 O2
ZZ
[28 ]
[29 ]
189
Acetyl Eburicoic Acid
512.3866
513.3924
−1.4
−2.7
46.01
[M + H]+
513.4417, 495.4774, 359.3011
C33 H52 O4
FL
[24 ]
190
Heneicosane
296.3443
297.3526
1.0
3.5
46.01
[M + H]+
297.3095, 283.2956
C21 H44
ZZ
[28 ]
[29 ]
191
Licorisoflavan A
438.2406
439.2451
−2.8
−6.3
46.02
[M + H]+
439.2524, 383.1993, 311.3788
C27 H34 O5
GC
[36 ]
192
Procyanidin B2
578.1424
579.1471
−2.6
−4.5
46.07
[M + H]+
579.1022, 551.3563, 495.3051
C30 H26 O12
RG
[31 ]
193
(2E )-1-Butoxy-2-hexene
156.1514
157.1593
0.6
3.8
46.07
[M + H]+
157.1593
C10 H20 O
GC
[36 ]
194
Gancaonin C
354.1103
355.1191
1.5
4.2
46.19
[M + H]+
355.1191
C20 H18 O6
GC
[36 ]
Abbreviation: CWD, Chushi Weiling Decoction.
a Abbreviations: CZ, Cangzhu; HP, Houpo; CP, Chenpi; GC, Gancao; ZX, Zexie; FL, Fuling;
ZL, Zhuling; RG, Rougui; BZ, Baizhu; ZZ, Zhizi; MT, Mutong; FF, Fangfeng; DXC, Dengxincao.
b Compared with reference substance.
Components Determined by GC-MS
A total of 92 components were identified from the samples of CWD by GC-MS, including
22 terpenes, 1 phenylpropanoid, 6 aromatics, 8 organic acids, 21 alcohols and esters,
20 simple ketones and aldehydes, and 14 other compounds. The results indicated that
these compounds mainly come from Cangzhu, Mutong, Chenpi, etc. The retention time,
ion peak, molecular formula, herb source (in abbreviation), and other information
are shown in [Table 3 ]. The ion flow diagram corresponding to peaks 195 to 286 is shown in [Fig. 2 ].
Fig. 2 Total ion flow diagram of CWD components in GC-MS. CWD, Chushi Weiling Decoction.
Table 3
Analysis and identification of components from CWD by GC-MS
Compd.
Component Name
Observed RT (min)
Observed m/z
Fragment Ions(m/z )
Formula
Herb-source (in Abbreviation* )
195
2-Hydroxyethyl acrylate
5.0
116.047
88.030, 72.990, 55.020
C5 H8 O3
FF
196
2,3-Butanediol
5.2
90.068
75.020, 57.040
C4 H10 O2
CZ, HP, ZX
197
3-Furaldehyde
5.7
96.021
96.000, 66.990
C5 H4 O2
FF, FL, CP, CZ
198
3-Methylvaleric Acid
6.2
116.084
87.000, 60.020
C6 H12 O2
BZ
199
2-Methylidenecyclopropane-1-carboxylic acid
6.3
98.037
98.010, 86.970, 74.020
C5 H6 O2
HP
200
Pentanoic acid
7.0
102.068
86.960, 73.000, 60.010
C5 H10 O2
RG
201
3,3-Dimethylacrylic acid
7.1
100.052
100.030, 82.010, 60.020
C5 H8 O2
MT
202
2-Valerylfuran
7.3
152.084
133.010, 109.990, 94.980, 59.980
C9 H12 O2
HP
203
Tetrahydropyran
7.5
86.073
108.050, 86.000, 72.990, 56.020
C5 H10 O
HP, RG
204
Carene
7.7
136.234
136.080, 122.020
C10 H16
MT
205
4-Methylanisole
7.8
122.073
122.030, 107.010, 79.000, 55.020
C8 H10 O
HP
206
Benzaldehyde
8.3
106.042
106.010, 94.990, 77.010
C7 H6 O
FF, RG, MT
207
5-Methyl-2-furaldehyde
8.3
110.037
109.990, 81.010
C6 H6 O2
GC, CP, ZL
208
5-Ethyl-2-methyl-2,3-dihydro-furan
8.4
112.089
111.930, 72.000, 54.980
C7 H12 O
CP
209
Methylal
8.5
76.094
76.020, 30.120
C3 H8 O2
BZ
210
2,4-Dihydroxy-2,5-dimethyl-3(2H )-furan-3-one
8.7
144.042
144.000, 100.990, 87.010, 73.000, 55.020
C6 H8 O4
FF
211
2-Amylfuran
8.8
138.207
138.040, 108.980, 82.040, 68.100
C9 H14 O
ZL
212
Hexanoic acid
9.0
116.084
87.020, 73.020, 60.020
C6 H12 O2
FF, ZX, ZL
213
α-Phellandrene
9.1
136.234
136.050, 122.010, 107.980
C10 H16
MT
214
α-Terpinene
9.3
136.234
136.000, 121.000, 93.200
C10 H16
FL
215
Pyrrole-2-carboxaldehyde
9.3
95.037
94.990, 72.960, 60.020
C5 H5 NO
FF
216
Cymene
9.4
134.110
123.050, 119.040, 104.970, 91.000, 72.930
C10 H14
HP, FL
217
D- Limonene
9.5
136.125
136.080, 107.050, 93.050, 79.050
C10 H16
FL, CP, MT
218
Eucalyptol
9.6
154.249
154.100, 139.000
C10 H18 O
FL, HP
219
2-Ethyl-5-propylcyclopentanone
9.6
154.136
154.120, 123.920, 112.000, 84.050
C10 H18 O
FF
220
1-Phenylpropane-1,2-diol
9.6
152.190
152.070, 136.020, 119.980
C9 H12 O2
CP
221
m-Cresol
9.7
108.058
108.030, 79.020
C7 H8 O
GC
222
3,5,5-Trimethylcyclohex-3-en-1-one
9.7
138.207
138.040, 95.980
C9 H14 O
ZZ
223
Phenylacetaldehyde
9.8
120.058
120.000, 91.030, 65.020
C8 H8 O
RG, FF, CP, HP, ZZ, ZL
224
Salicylaldehyde
9.8
122.121
122.030, 93.010, 76.000
C7 H6 O2
FL
225
γ-Caprolactone
10.0
114.068
85.000, 55.030
C6 H10 O2
CP
226
Ethyl 4-ethyloxy-2-oxobut-3-enoate
10.0
172.074
136.000, 99.050, 71.080
C8 H12 O4
CP
227
γ-Terpinene
10.0
136.234
136.020, 121.100, 93.050
C10 H16
FL
228
2-Acetylpyrrole
10.1
109.053
109.930, 94.010, 66.020
C6 H7 NO
FF, HP
229
n -Heptanoic acid
10.4
130.099
127.920, 87.020, 73.010, 60.020
C7 H14 O2
RG
230
Terpinolene
10.5
136.234
136.080, 121.050
C10 H16
FL
231
Linalool
10.7
154.136
121.010, 93.030, 71.030
C10 H18 O
ZZ
232
Isophorone
11.1
138.104
123.070, 126.030, 82.030
C9 H14 O
GC, ZZ
233
3-Phenylpropanal
11.7
134.073
134.040, 115.020, 103.050
C9 H10 O
RG, CP, ZZ
234
Menthol
11.9
156.151
134.020, 123.080, 109.050, 95.050, 85.080
C10 H20 O
GC, RG, ZZ, MT, BZ, CZ, FL, ZL
235
Octanoic acid
12.0
144.211
144.010, 99.030
C8 H16 O2
FF
236
Thymol
12.1
150.104
135.040, 122.000
C10 H14 O
RG, CP, HP
237
Terpineol
12.2
154.136
136.080, 121.020, 84.980
C10 H18 O
CP
238
Safranal
12.3
150.104
135.030, 121.060, 107.040, 79.030
C10 H14 O
ZZ
239
3,5,5-Trimethyl-4-methylen-2-cyclohexen-1-on
12.6
150.218
150.120, 135.010, 107.960
C10 H14 O
ZZ
240
5-Hydroxymethylfurfural
12.7
126.032
135.040, 108.960, 69.020
C6 H6 O3
CP, MT, ZX
241
3-Phenylpropanol
12.8
136.089
117.040, 103.010, 72.940
C9 H12 O
RG
242
5-Indanol
13.1
134.175
134.010, 118.970
C9 H10 O
HP
243
p-Allylphenol
13.1
134.073
134.030, 118.990, 105.010, 72.960
C9 H10 O
RG, HP
244
R-γ-Decalactone
13.2
170.131
133.970, 109.960, 95.030
C10 H18 O2
FF
245
Nonanoic acid
13.2
158.131
127.030, 115.020, 98.020
C9 H18 O2
FF, RG
246
Cinnamaldehyde**
13.4
132.058
131.030, 114.980, 77.030
C9 H8 O
RG, GC, FL, HP, CP, BZ, ZZ
247
1,3,3-Trimethyl-2-vinyl-1-cyclohexene
13.7
150.141
135.010, 121.000, 106.980, 76.920
C11 H18
GC, ZZ
248
Cinnamyl alcohol
13.8
134.073
115.010, 92.030, 78.000
C9 H10 O
RG
249
o-Acetyl-p-cresol
13.9
150.068
135.010, 107.020
C9 H10 O2
ZZ
250
2-Methoxy-4-vinylphenol
13.9
150.174
135.070, 118.990, 88.970
C9 H10 O2
CP
251
4′-Hydroxy-2′-methylacetophenone
13.9
150.174
150.120, 136.010, 117.960, 89.960
C9 H10 O2
ZZ
252
1-Butyl-3-methylcyclohex-2-en-1-ol
14.0
168.151
134.970, 120.930, 77.000
C11 H20 O
HP
253
4,4,6-Trimethylcyclohex-2-en-1-ol
14.3
140.120
125.070, 84.010
C9 H16 O
ZZ
254
Apricolin
14.6
156.115
128.010, 85.000
C9 H16 O2
CP
255
2-Methoxyphenylacetone
14.7
164.084
135.0500, 121.020, 91.050
C10 H12 O2
RG
256
Modhephene
15.0
204.351
204.160, 189.960, 161.960
C15 H24
MT
257
Berkheyaradulene
15.0
204.350
204.120, 190.020, 175.980
C15 H24
MT
258
Vanillin
15.1
152.047
136.920, 122.940, 78.980
C8 H8 O3
CP, DXC, HP
259
trans -Caryophyllene
15.5
204.351
204.120, 192.000, 134.020
C15 H24
MT
260
γ-Elemene
15.6
204.351
204.140, 191.980, 135.960
C15 H24
MT
261
Coumarin
15.7
146.037
134.010, 118.010,
C9 H6 O2
FF, RG, HP
262
Paeonol
15.7
166.174
166.060, 148.980, 134.000, 106.090
C9 H10 O3
ZL
263
Massoia lactone
16.1
168.115
123.000, 97.010, 67.990
C10 H16 O2
RG, HP
264
γ-Selinene
16.1
204.351
204.120, 190.000, 175.960
C15 H24
MT
265
α-Curcumene
16.2
202.335
202.070, 175.990, 118.020, 89.950
C15 H22
MT
266
Pentanoic acid, 5-hydroxy-, 2,4-bis(1,1-dimethylethyl)phenyl ester
16.5
306.219
252.910, 191.090, 109.080
C19 H30 O3
GC
267
β-Sesquiphellandrene
16.7
204.351
204.120, 192.020
C15 H24
MT
268
Dihydroactinidiolide
16.9
180.115
179.990, 137.070, 111.020
C11 H16 O2
CP
269
Valencene
16.9
204.351
204.160, 189.980, 161.960, 136.010
C15 H24
MT
270
γ-Eudesmol
18.0
222.366
222.130, 206.020, 177.980
C15 H26 O
HP
271
trans -Isoelemicin
18.1
208.254
208.050, 178.030, 147.980
C12 H16 O3
HP
272
Agarospirol
18.1
222.366
222.100, 206.010, 178.980, 126.020
C15 H26 O
MT, BZ, CZ
273
β-Eudesmol
18.3
222.198
204.130, 189.120, 149.080
C15 H26 O
BZ, CZ, FF, HP, MT
274
α-Eudesmol
18.3
222.366
222.100, 206.010, 178.980
C15 H26 O
HP
275
Atractylon
18.4
216.319
202.100, 178.020, 136.100
C15 H20 O
CZ, BZ, MT
276
Sandacanol
18.7
208.183
176.120, 161.100, 90.950, 69.010
C14 H24 O
RG
277
1-[(1S ,3aR ,4R ,7S ,7aS )-4-Hydroxy-4-methyl-7-propan-2-yl-1,2,3,3a,5,6,7,7a-octahydroinden-1-yl]ethanone
19.2
238.193
238.140, 205.070, 153.050, 135.050
C15 H26 O2
ZX, CZ
278
Longifolenaldehyde
19.5
220.183
220.160, 206.950, 121.070, 104.990, 95.020
C15 H24 O
ZX
279
Senkyunolide J
19.5
226.121
182.060, 152.030, 125.980, 111.040
C12 H18 O4
FF
280
Isospathulenol
19.6
220.183
220.150, 205.120, 162.110, 119.070
C15 H24 O
ZX
281
1-epi-Cubenol
19.8
222.198
206.990, 179.080, 162.070, 147.090, 135.020
C15 H26 O
RG
282
Tetridamine
19.9
165.127
165.020, 149.100, 119.990
C9 H15 N3
MT
283
Cryptomeridiol
20.1
240.209
204.140, 149.090
C15 H28 O2
CZ, HP
284
Diisobutyl phthalate
20.5
278.344
278.120, 223.010, 149.030, 103.960
C16 H22 O4
CP
285
7,9-Ditert-butyl-1-oxaspiro[4.5]deca-6,9-diene-2,8-dione
21.0
276.173
261.050, 232.080, 217.100, 205.060, 175.050
C17 H24 O3
FL, ZL
286
β-Cyclocostunolide
22.6
232.318
232.140, 217.990, 204.000
C15 H20 O2
BZ
Abbreviation: CWD, Chushi Weiling Decoction; RT, retention time.
*Abbreviation: CZ, Cangzhu; HP, Houpo; CP, Chenpi; GC, Gancao, ZX, Zexie; FL, Fuling;
ZL, Zhuling; RG, Rougui; BZ, Baizhu; ZZ, Zhizi; MT, Mutong; FF, Fangfeng; DXC, Dengxincao.
**Compared with reference substance.
Total Components Determined of CWD
The total of 286 components from the samples of CWD included 93 terpenes, 37 flavonoids,
11 steroids, 12 phenylpropanoids, 8 alkaloids, 17 aromatics, 16 organic acids, 34
alcohols and esters, 26 simple ketones and aldehydes, and 32 other compounds.
From the perspective of medicinal herbs, there are 30 compounds in Cangzhu, 54 compounds
in Houpo, 25 compounds in Chenpi, 35 compounds in Gancao, 19 compounds in Zexie, 37
compounds in Fuling, 14 compounds in Zhuling, 40 compounds in Rougui, 19 compounds
in Baizhu, 33 compounds in Zhizi, 26 compounds in Mutong, 25 compounds in Fangfeng,
and 2 compounds in Dengxincao in CWD.
Research of Cracking Rules
To systematically and qualitatively analyze the chemical components in CWD, the MS
behaviors of the samples were studied to summarize their cracking rules and characteristic
fragment ions based on relevant literature.[19 ]
[20 ]
[21 ]
[22 ]
[23 ]
[24 ]
[25 ]
[26 ]
[27 ]
[28 ]
[29 ]
[30 ]
[31 ]
[32 ]
[33 ]
[34 ]
[35 ]
[36 ]
[37 ]
[38 ]
[39 ]
[40 ]
Mass Spectrometric Cracking Rules of Terpenoids
Terpene compounds are the general term for compounds and their derivatives with a
molecular formula multiple of isoprene. Based on relevant literature, the terpenoids
in CWD were preliminarily classified: in the CWD, the terpenoids in Cangzhu (compounds
3 , 27 , 45 , 47 , 49 , 51 , 58 , 63 , 73 , 81 , 84 , 92 , 158 , and 122 ), Baizhu (compounds 27 , 51 , 81 , 92 , and 114 ), and Mutong (compounds 71 , 136 , and 167 ) were mainly sesquiterpenoids.[19 ]
[20 ]
[21 ]
[22 ] The terpenoids in Fuling (compounds 85 , 91, 99 , 102 , 104 , 105 , 112 , 120 , 128 , 137 , 146 , 147 , 155 , 160 , 172 , 173 , 175 , and 189 ) and Zhuling (compounds 153 , 165 , 170 ) were mainly lanostelane type triterpenes, while the terpenoids in Zexie (compounds
22 , 109 , 129 , 132 , 150 , 154 , 157 , 159 , 161 , 174 , 177 , and 179 ) were mainly prototerpenane type tetracyclic triterpenes.[23 ]
[24 ]
[25 ]
[26 ]
[27 ] The terpenoids in Zhizi (compounds 8 , 15 , 16 , 33 , 94 , 100 , 113 , 125 , 167 , and 186 ) were mainly iridoids and their glycosides.[28 ]
[29 ]
[30 ] In addition, there are also terpenoids (compounds 28 , 30 , 53 , 78 , 135 , 139 , 141 , 143 , 156 , 176 , and 180 ) in other medicinal herbs.[31 ]
[32 ]
[33 ]
There are three main rules for the cleavage of terpenoids: (1) when a compound forms
a glycoside, it can lose all saccharides first, to obtain fragment ions. For example,
genipin-1-O- gentiobioside (8 ; m/z 549.18096 [M − H]− ) of Zhizi is an iridoid glycoside compound containing one group of gentian disaccharide
(i.e., two molecules of glucose). In its secondary mass spectrometry, genipin-1-O- gentiobioside sequentially lost two glucose groups, generating fragment ions of m/z 387.12365 [M – H - Glc]− and 225.06502 [M – H - 2Glc]− . (2) Terpene skeletons are prone to lose neutral groups such as CO, CO2 , and H2 O. (3) If the terpenoid skeleton forms a six-membered ring with unsaturated double
bonds during mass spectrometry cleavage, it is prone to RDA cleavage. During the cracking
process of genipin-1-O- gentiobioside, a six-membered ring containing unsaturated double bonds was generated,
to obtain fragment ions of m/z 123.03313 ([Fig. 3 ]) through RDA cracking. This is consistent with the reference.[29 ]
[30 ]
Fig. 3 Mass fragmentation pathways and secondary mass spectra of genipin-1-O- gentiobioside.
Atractylenolide I (81 ; m/z 231.13876 [M + H]+ ) in Cangzhu and Baizhu is a sesquiterpene lactone. In the positive ion mode, the
ester bond broke on the five-membered lactone ring, to generate fragment ions of m/z 189.12743. Then, fragment ions of m/z 163.11331 or 145.14062 were generated through the cracking progress of the six-membered
ring ([Fig. 4 ]).
Fig. 4 Mass fragmentation pathways and secondary mass spectra of atractylenolide I.
Mass Spectrometric Cracking Rules of Flavonoids
Flavonoids are widely distributed in the plant kingdom, often forming glycosides through
O -glycosidic bonds. Based on relevant literature,[28 ]
[29 ]
[30 ]
[31 ]
[32 ]
[33 ]
[34 ]
[35 ]
[36 ] the flavonoids in CWD were preliminarily classified. There were a total of 37 confirmed
flavonoids in CWD (compounds 4 –6 , 23 –26 , 31 , 32 , 36 , 40 , 50 , 54 , 60 , 64 , 65 , 69 , 72 , 74 -76 , 80 , 82 , 95 , 98 , 110 , 115 , 124 , 127 , 140 , 152 , 164 , 168 , 178 , 191 , 192 , and 194 ), mainly from medicinal herbs such as Chenpi, Fangfeng, Gancao, Rougui, and Zhizi.
Through research on the cleavage patterns of flavonoids in CWD, we found that: (1)
loss of saccharide groups tends to occur in flavonoid glycosides. (2) RDA cleavage
reaction tends to occur on the C-ring of flavonoids. (3) Neutrality loss of CO, CO2 , and H2 O often occurs. These rules are consistent with reference.[34 ]
[35 ]
Taking quercitrin (6 ; m/z 449.11080 [M + H]+ ) contained in Zhizi as an example, in the positive ion mode, the loss of rhamnose
(m/z 146) occurred, generating fragment ions of m/z 303.96551 [M + H − Rha]+ . Quercetin fragment ions continued to have RDA cleavage at positions 1,3 A of the C-ring, generating 1,3 A ions at m/z 153.06728. In addition, RDA cleavage could also occur at positions 1,2 A; 0,2 A; 1,4 A; or 0,4 A of the C-ring ([Fig. 5 ]). This cleavage pathway was believed to be reliable by comparing with reference.[34 ]
Fig. 5 Mass fragmentation pathways and secondary mass spectra of quercetin.
Mass Spectrometric Cracking Rules of Phenylpropanoids
Phenylpropanoid compounds include phenylpropanoic acids, coumarins, and lignans. Based
on relevant literature,[31 ]
[32 ]
[33 ]
[37 ] the phenylpropanoids in CWD were preliminarily classified. The phenylpropanoid compounds
(compounds 7 , 17 , 29 , 55 , 62 , 66 , 70 , 77 , 86 , 130 , 134 , and 261 ) in CWD mainly came from Houpo, Fangfeng, and Rougui. Phenylpropanoic acid ester
bonds are prone to cleavage to generate phenylpropanoic acid fragment ions. Different
characteristic skeleton fragment ions are generated due to different mother nucleus
structures: fragment ions of m/z 179, 161, and 135 can be inferred to contain caffeoyl fragment ions, and m/z 193, 175, and 160 can be inferred to contain ferulic acid fragments ions, and m/z 163 and 119 can be inferred to contain para -coumarin acid fragment ions, which was consistent with the pyrolysis rule of phenylpropanoids
in the positive ion mode described in the literature.[36 ]
[38 ] The fragment ions often have a neutral loss of CO, H2 O, and CO2 .
Anomalin (29 ; m/z 427.17103 [M + H]+ ) contained in Fangfeng is a derivative of pyranocoumarin with a total of three ester
bonds. In the positive ion mode, anomalin was prone to ester bond cleavage and neutral
loss of 2-methyl-2-butenoic acid groups ([Fig. 6 ]), which can be referred to in the literature.[38 ]
Fig. 6 Mass fragmentation pathways and secondary mass spectra of anomalin.
Mass Spectrometric Cracking Rules of Phenols, Acids, and Esters
Under the conditions of dissociation, the main mass spectrometry cleavage pathway
of phenolic compounds is the loss of substituents in the structure. Based on relevant
literature,[26 ]
[27 ]
[28 ]
[29 ]
[30 ]
[31 ]
[32 ]
[33 ]
[34 ]
[35 ]
[36 ] the phenols, acids, and esters in CWD were preliminarily classified. There were
a total of 44 confirmed phenolic, acid, and ester compounds in CWD (compounds 1 , 18 , 21 , 37 , 38 , 41 , 44 , 56 , 57 , 59 , 83 , 87–89 , 93 , 96 , 116 , 117 , 142 , 145 , 151 , 182 , 184 , 187 , 195 , 198-201 , 212 , 221 , 225 , 226 , 228 , 230 , 236 , 244 , 245 , 250 , 254 , 266 , 270 , 279 , and 284 ). In the secondary mass spectrometry of phenolic glycosides, high-abundance fragment
ions often originate from the loss of saccharides. Carboxylic acids and their ester
compounds are prone to α-cracking, neutral loss of R or OR' groups (depending on which
bond of the O atom breaks), and loss of CO, generating [R + H]+ and [OR' + H]+ fragment ions in positive ion mode. Generally speaking, the ion peak intensity generated
by aromatic compounds and their esters is stronger than that of fatty acids and their
esters.[20 ]
[21 ]
[22 ]
[23 ]
[24 ]
Taking paeonolide (38 ; m/z 460.94828 [M + H]+ ), a component in Cangzhu, as an example, it has paeonol as a aglycone and contains
a nonreducing terminal 1-α-arabinopyranoside. During the dissociation process, paeonolide
gradually removed saccharide groups and generated fragment ions of m/z 167.13227. Afterward, fragment ions of m/z 137.13492 and phenol fragments were generated ([Fig. 7 ]).[30 ]
Fig. 7 Mass fragmentation pathways and secondary mass spectra of paeonolide.
Mass Spectrometric Cracking Rules of Alkaloids
Alkaloids are a class of natural compounds containing basic nitrogen atoms, often
with nitrogen heterocyclic structures. Based on relevant literature,[21 ]
[22 ]
[33 ]
[37 ]
[38 ]
[39 ] the alkaloids in CWD were preliminarily classified and the cracking rules of alkaloids
were summarized. The alkaloid components (compounds 10 , 11 , 34 , 35 , 67 , 119 , 126 , and 131 ) in CWD mainly included aporphine alkaloids, isoquinoline alkaloids, and other alkaloids,
which are mainly from Houpo, Mutong, and Fangfeng. Alkaloids have various cleavage
patterns based on the different C–N skeleton structures, among which the most important
fragmentation patterns are four: (1) the groups connected to N atoms are prone to
loss, generating fragments such as CH2 , CH4 , NH2 , NH4 , etc. (2) When the alkaloid contains hydroxyl substitutions, it can cause neutral
loss of H2 O and methylene. When the alkaloid contains carboxyl substituents, it can cause a
loss of CO2 . The alkaloid skeleton with multiple hydroxyl groups in the side chain is prone to
breakage and dehydration rearrangement. (3) When the alkaloid has a tetrahydroisoquinoline
structure, an RDA cleavage reaction can occur, producing complementary fragment ions.
(4) After the cleavage of benzyl isoquinoline alkaloids, benzyl fragment ions will
be produced, resulting in typical peaks that are different from other types of alkaloids.
Dauricine (131 ; m/z 625.32900 [M + H]+ ) in Mutong is a type of bis benzyl tetrahydroisoquinoline alkaloid. In the positive
ion mode, the cleavage at positions C-1 and C-1a would produce benzyl fragment ions
at m/z 107.12712, which was a typical fragment ion different from the aporphine alkaloids
mentioned above.[39 ] In the secondary mass spectrometry, after the loss of benzyl fragment ions, the
mother nucleus fragment ions of dauricine, m/z 205.21913, continued to generate fragments ions of m/z 189.16320 and 161.15241 ([Fig. 8 ]).
Fig. 8 Mass fragmentation pathways and secondary mass spectra of dauricine.
Results on Network Pharmacology
Active Component and Targets Collection in CWD
After the screening (OB ≥ 30%, DL ≥ 0.18) and searching in relevant literature data,
143 chemical components for CWD were obtained from TCMSP. Furthermore, 1,051 targets
for CWD were predicted by SwissTargetPrediction. A total of 4,174 related targets
of “eczema” and “herpes zoster” were selected from the Drugbank database, the Genecards
database, and the OMIM database. Finally, 1,051 targets of CWD and 4,174 disease-related
targets were mapped to the Venn. A total of 362 overlapping targets were obtained.
Analysis of the PPI Network and “Compounds–Targets” Network
A total of 362 intersection targets were inputted into STRING 11.0, and the results
show that the network consists of 6,280 edges, with an average degree value of 34.7
and an average local clustering coefficient of 0.501, p < 1.0E-16.
Nodes with a degree value less than 25 were deleted, and 48 core target proteins were
used to form the protein–protein interaction (PPI) core network, then isolated targets
without interaction were removed, as shown in [Fig. 9 ]. In the PPI network diagram, different colored lines between targets represent different
evidence, with green representing adjacent genes, red representing fusion genes, and blue representing co-occurrence genes. The thicker the connecting lines, the stronger
the interaction between proteins, indicating more interactions between proteins rather
than the expected interactions of a random set of proteins extracted from the genome.
The top 10 core targets for degree ranking were CYP19A1 (cytochrome P450 family 19
subfamily A member 1), AR (androgen receptor), HMGCR (3-hydroxy-3-methylglutaryl-coenzyme
A reductase), ESR1 (estrogen receptor 1), PTGS2 (prostaglandin-endoperoxide synthase
2), ALOX5 (arachidonate 5-lipoxygenase), SHBG (sex hormone-binding globulin), NOS2
(nitric oxide synthase 2), ADORA3 (adenosine A3 receptor), and NR3C1 (nuclear receptor
subfamily 3 group C member 1).
Fig. 9 The PPI network of protein interaction relationships. PPI, protein–protein interaction.
Screening of Active Ingredients
According to the “compounds–targets” network, the compounds with the highest degree
ranking indicated that they were more likely to participate in a certain treatment
process and related signaling pathways, and had stronger interactions with target
proteins. By intersecting 143 core components in network pharmacology with 287 components
of CWD, 25 overlapping components were obtained, with their numbers and degree values
shown in [Table 4 ]. This indicates that these components may have therapeutic effects on eczema and
herpes zoster.
Table 4
Overlapping components of material basis and network pharmacology
Compd.
Component name
Herb-source (in Abbreviation[a ])
Average shortest path length
Closeness centrality
Stress
Degree
157
Alisol J 23-acetate
ZX
2.547
0.393
1026334
50
170
Polyporusterone A
ZL
2.567
0.390
991250
48
178
Kaempferol
ZZ
2.555
0.391
887930
47
29
Anomalin
FF
2.575
0.388
992448
47
99
Dehydrotumulosic acid
FL
2.594
0.385
737238
46
151
Crepenynic acid
BZ
2.650
0.377
677680
40
120
16-Deoxyporicoic acid B
FL
2.626
0.381
463502
39
12
2-Hydroxyisoxypropyl-3-hydroxy-7-isopentene-2,3-dihydrobenzofuran-5-carboxylic
CZ
2.746
0.364
808492
34
162
Stigmast-4-ene-3,6-dione
RG
2.642
0.378
500454
33
167
Stigmasterol
MT, ZZ
2.757
0.363
172222
22
94
Geniposide
ZZ
2.813
0.355
210508
17
17
Erthro-guaiacy lglycerol
RG
2.813
0.355
243830
16
103
Icariside F2
CZ, BZ
2.944
0.340
304602
15
92
8β-Ethoxy atractylenolide III
CZ, BZ
2.905
0.344
227614
15
168
Hesperidin
CP
2.781
0.360
157740
13
149
Oleanolic acid-28-O- β-D- glucopyranoside
HP
2.920
0.342
51986
12
40
Nobiletin
CP
2.765
0.362
72624
11
173
Poricoic acid ZG
FL
2.940
0.340
34882
10
152
Citromitin
CP
2.797
0.357
47464
9
80
(+)-Leptolepisol C
RG
3.091
0.323
35944
9
58
Oxypaeoniflorin
CZ
3.131
0.319
25476
7
19
Sinapaldehyde 4-O- β-D- glucopyranoside
HP
3.258
0.307
27060
4
45
Atractyloyne
CZ
3.469
0.288
3016
4
116
Syringin
CZ
3.183
0.314
1620
3
65
Xambioona
GC
4.010
0.249
0
1
a Abbreviation: CZ, Cangzhu; HP, Houpo; CP, Chenpi; GC, Gancao; ZX, Zexie; FL, Fuling;
ZL, Zhuling; RG, Rougui; BZ, Baizhu; ZZ, Zhizi; MT, Mutong; FF, Fangfeng.
Gene Ontology and KEGG Pathway Enrichment Analysis
GO and KEGG pathway enrichment analysis was performed on key intersection target genes
to obtain the top 25 GO and KEGG signaling pathways, and they were annotated separately.
Based on the PPI network, pathway enrichment analysis used protein interaction and
metabolic pathway information to predict the therapeutic mechanism of CWD. This is
a method beneficial for studying the holistic nature of CWD from a multi-pathway and
multi-target perspective and can transform the overall effects of TCM decoction into
descriptions used in modern pharmacology.
As shown in [Fig. 10 ], GO enrichment analysis revealed a total of 52 pathways, and the enrichment results
showed that the biological process mainly included pathways such as biological regulation,
single organism process, cellular process, response to stimuli, and regulation of
biological process; cellular component mainly included pathways such as cell, cell
part, organelle, membrane and organelle part; molecular function mainly included pathways
such as binding, catalytic activity, signal transducer activity, molecular transducer
activity, and nucleic acid binding transcription factor activity.
Fig. 10 Visualization and annotation of GO pathway enrichment analysis (top 25).
KEGG enrichment analysis resulted in a total of 194 pathways ([Fig. 11 ]
) , covering multiple aspects such as metabolism, genetic information processing, environmental
information processing, cellular processes, organismal systems, and human diseases.
The top 25 mainly included the pathways in cancer, prostate cancer, proteoglycans
in cancer, the vascular endothelial growth factor signaling pathway, the C-type lectin
receptor signaling pathway, and human cytomegalovirus infection.
Fig. 11 Visualization and annotation of KEGG pathway enrichment analysis (top 25).
Reactome Enrichment Analysis
Using the Metascape platform, Reactome analysis covered a total of 15 pathways ([Fig. 12 ]), including signaling by interleukins, nuclear receptor transcription pathway, metabolism
of lipids, signaling by receptor tyrosine kinases, and metabolism of steroids ([Table 5 ]).
Table 5
Reactome pathways (top 5)
Category
GO ID
Description
Count
%
Log10(P )
Log10(q )
Reactome Gene Sets
R-HSA-449147
Signaling by Interleukins
14
29.17
−13.89
−10.7
Reactome Gene Sets
R-HSA-383280
Nuclear receptor transcription pathway
8
16.67
−13.81
−10.7
Reactome Gene Sets
R-HSA-556833
Metabolism of lipids
15
31.25
−12.49
−9.78
Reactome Gene Sets
R-HSA-9006934
Signaling by receptor tyrosine kinases
11
22.92
−9.32
−6.86
Reactome Gene Sets
R-HSA-8957322
Metabolism of steroids
7
14.58
−8.32
−5.91
Note: Log10(P ) describes the significant level of gene enrichment, the smaller the value, the higher
the significance; Log10(q ) describes corrected Log10(P ) value.
Fig. 12 Visualization and annotation of Reactome enrichment analysis.
Molecular Docking Analysis
Based on the above research, alisol J 23-acetate (157 ), kaempferol (178 ), anomalin (29 ), icariside F2 (103 ), and cinnamaldehyde (246 ) ([Fig. 13 ]) with high degree values were selected. These five components belong to naturally
occurring major active constituents in the monarch drug Cangzhu, ministerial drugs
Zhizi, Zexie, Fangfeng, and adjuvant drug Rougui of CWD, which have representative
structures as terpene, flavonoid, phenylpropanoid, aromatic glycoside, and aldehyde.[27 ]
[28 ]
[29 ]
[30 ]
[31 ] Therefore, they were used to molecularly dock with core targets CYP19A1, AR, and
HMGCR (HMG-CoA) ([Fig. 14 ]) using autodock software. The mode with the lowest binding energy was selected for
plotting. The dark part represents the 3D conformation of the target protein, while
the highlighted part represents the ligand molecular structure in [Fig. 15 ]. The results showed that the molecular docking binding energies of CYP19A1, AR,
HMGCR with alisol J 23-acetate (157 ), kaempferol (178 ), anomalin (29 ), cinnamaldehyde (246 ) were the lowest, mostly lower than −5.00 kcal/mol, indicating strong binding activity
between these active ingredients and the targets ([Table 6 ]).
Table 6
The lowest binding energy of molecular docking between CYP19A1, AR, HMGCR, and different
components
The lowest binding energy (kcal·mol−1 )
CYP19A1
AR
HMGCR
Alisol J 23-acetate
−7.19
−6.16
−5.77
Kaempferol
−5.95
−5.00
−5.17
Anomalin
−7.08
−4.60
−5.38
Icariside F2
−2.78
−1.87
−1.83
Cinnamaldehyde
−4.38
−4.81
−5.32
Fig. 13 Chemical structures of alisol J 23-acetate (157 ), kaempferol (178 ), anomalin (29 ), icariside F2 (103 ), and cinnamaldehyde (246 ).
Fig. 14 Target protein conformation of CYP19A1, AR, and HMGCR (HMG-CoA).
Fig. 15 Molecular docking results. The 3D conformation of target protein CYP19A1, AR, and
HMGCR was presented from left to right, respectively.
Discussion
CWD is commonly used in the treatment of eczema and herpes zoster. It clears heat
removes dampness, and strengthens the spleen and diuresis. Nevertheless, there is
still insufficient research on the material basis and pharmacology of CWD. This study
integrates the research results of UPLC-Q-TOF-MS, GC-MS, network pharmacology, and
molecular docking to provide a basis for further research.
Through analysis from the PPI network and pathway enrichment (KEGG, GO, and Reactome)
of CWD, it was found that the main target proteins of CWD in the treatment of eczema
and herpes zoster were CYP19A1, AR, HMGCR, ESR1, PTGS2, etc. Based on the interactions
and metabolic pathway information involved in these proteins, enrichment analysis
can be summarized as follows: CWD may regulate C-type lectin receptor signaling pathway,
human cytomegalovirus infection, interleukin-17 signaling pathway, inflammatory mediators
of TRP channel, serotonergic synapses, arachidonic acid metabolism, and Fc-ε-biological
pathways such as the RI signaling pathway, to act on anti-inflammatory and antiviral
mechanisms. The target proteins above have been proven to be key enzymes in metabolic
pathways such as the synthesis of estrogen, synthesis of cholesterol, prostaglandin
biosynthesis, and arachidonic acid metabolism.[41 ]
[42 ]
[43 ]
[44 ] This result indicates CWD may have the potential to regulate immune response mechanisms,
which are usually the most important in the treatment of eczema and herpes zoster
diseases.
From the perspective of active ingredients, some researchers have confirmed that natural
products from 14 Chinese medicinal materials in CWD such as oxypaeoniflorin (58 ), kaempferol (178 ), geniposide (94 ), icariside F2 (103 ), and hesperidin (168 ), have anti-inflammatory, antibacterial, and anti-infective effects.[45 ]
[46 ]
[47 ]
[48 ]
[49 ] These components can reduce the expression level of inflammatory factors and reduce
vascular permeability. Molecular docking also showed good binding activity of the
above natural products with target proteins CYP19A1, AR, and HMGCR (HMG-CoA). These
results to some extent mutually verified the analysis of the PPI network and pathway
enrichment.
Besides, research has shown that natural steroid compounds in Chinese herbal medicine
can exert therapeutic effects through these receptor signaling pathways, meanwhile,
steroid hormone-like regulatory effects are also an important way to treat immune
diseases.[50 ]
[51 ]
[52 ] Atractylodin and atractylone (atractyloyne, 45 ) contained in Cangzhu also have diuretic effects.[45 ]
[46 ] Alisol (Alisol J 23-acetate, 157 ) in Zexie can significantly increase liver tissue SOD content, inhibit leukotriene
production and β-hexosaminase release, reduce oxidative damage, and inhibit delayed
allergic reactions.[53 ] Polyporusterone (polyporusterone A, 170 ) and poricoic acid (16-deoxyporicoic acid B, 120 ; poricoic acid ZG, 173 ) in Fuling and Zhuling can regulate blood lipids and reduce sodium and water retention.
The sterones and sterols (ergone, cerevisterol) in Fuling have been proven to have
diuretic functions, while increasing urine output, they can also increase the excretion
of electrolytes such as K+ , Na+ , and Cl− . Fuling extract poricoic acid can play a similar role as an aldosterone antagonist.[54 ]
[55 ] The pharmacological effects of these compounds are consistent with the “dehumidification”
and “diuretic” effects of CWD and can reflect the possible steroid hormone-like regulatory
effects to adjust the water-electrolyte metabolism.
In summary, all the analyses and examples indicate that CWD may have therapeutic effects
on eczema and herpes zoster through the above core proteins, pathways, and ingredients
from Chinese medicinal materials.