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DOI: 10.1055/s-2003-44689
Georg Thieme Verlag Stuttgart · New York
Genetic Isolation and Diffusion of Wild Grapevine Italian and Spanish Populations as Estimated by Nuclear and Chloroplast SSR Analysis
Publication History
Publication Date:
02 February 2004 (online)

Abstract
Genetic structure of six Italian and five Spanish populations of wild grapevine (Vitis vinifera ssp. silvestris) was investigated using nuclear and chloroplast SSR analysis. Results show that the Italian populations are characterised by high genomic diversity within populations, with a peak of heterozygosity (Ho = 0.7637) for a population collected in southern Italy. However, the low haplotype richness and the high level of genetic distance detected among the Spanish populations, combined with their low gene flow, shows that these populations suffered from a genetic erosion. Genetic relationship between Italian and Spanish populations was investigated and results showed genetic differentiation between the two populations. Using nuclear and chloroplast SSR markers, the ratio between pollen and seed diffusion was estimated. High pollen flow, as compared with seed flow, suggests that seed diffusion is made difficult, probably due to low germinability and survival of seedlings in the wild. Seed germination and young plant survival must be considered a priority target for in situ conservation programmes. By providing information on population history, genetic structure and gene flow, and by identifying areas harbouring high levels of wild grape variability, this study provides the basis for the preservation of biodiversity of the wild grapevine.
Key words
Biodiversity - chloroplast SSR - molecular tool - nuclear SSR - Vitis vinifera ssp. silvestris.
References
- 1 Alleweldt G.. Genetics of grapevine breeding. Progress in Botany. (1997); 58 442-454
- 2 Anzani R., Failla O., Scienza A., Campostrini F.. Wild grapevine (Vitis vinifera var. silvestris) in Italy: distribution, characteristics and germplasm preservation - 1989 report. Vitis, Special Issue. (1990); 29 97-112
- 3 Arnold C., Gillet F., Gobat J. M.. Situation de la vigne sauvage Vitis vinifera ssp. silvestris in Europe. Vitis. (1998); 37 159-170
- 4 Belkhir K.. GENETIX, Version 4.0. A Windows Program for Population Genetic Analysis. Laboratoire Genome, Populations: Interactions UPR 9060 du CNRS, Université Montpellier 2, Montpellier, France. (1999)
- 5 Bowers J. E., Dangl G. S., Meredith C. P.. Development and characterization of additional microsatellite DNA markers for grape. American Journal of Enology and Viticulture. (1999); 50 243-246
- 6 Bowers J. E., Dangl G. S., Vignani R., Meredith C. P.. Isolation and characterization of new polymorphic simple sequence repeat loci in grape (Vitis vinifera L.). Genome. (1996); 39 628-633
- 7 Campostrini F., Anzani R., Failla O., Iacono F., Scienza A., De Micheli L.. Application de l'analyse phyllomètrique à la classification géographique de la population italienne de la vigne savage (Vitis vinifera L. ssp. silvestris). . International Journal of Vine and Wine Science. (1993); 27 255-262
- 8 Chung M. G., Chung M. Y., Epperson B. K.. Conservation genetics of endangered Herb, Hanabusaya asiatica (Campanulaceae). Plant Biology. (2002); 3 42-49
- 9 Demesure B., Comps B., Petit R. J.. Chloroplast DNA phylogeography of the common beech (Fagus sylvatica L.) in Europe. Evolution. (1996); 50 2510-2515
- 10 Dumolin-Lapègue S., Demesure B., Le Corre V., Fineschi S., Petit R. J.. Phylogeographic structure of white oaks throughout the European continent. Genetics. (1997); 146 1475-1487
- 11 Ennos R. A.. Estimating the relative rates of pollen and seed migration among plant populations. Heredity. (1994); 80 584-593
- 12 Failla O., Anzani R., Scienza A.. Wild grapevines in Italy: diffusion, characteristics and germplasm conservation. Vignevini. (1992); 19 37-46
- 13 Fineschi S., Taurchini D., Villani F., Vendramin G. G.. Chloroplast DNA polymorphism reveals little geographical structure in Castanea sativa Mill. (Fagaceae) throughout southern European countries. Molecular Ecology. (2000); 9 1495-1503
- 14 Friar E. A., Boose D. L., Ladoux T., Roalson E. H., Robichaux R. H.. Population structure in the endangered Mauna Loa silversword, Argyroxiphium kauense (Asteraceae), and its bearing on reintroduction. Molecular Ecology. (2001); 10 1657-1663
- 15 Govindaraju D. R.. Relationship between dispersal ability and levels of gene flow in plants. Oikos. (1988); 52 31-35
- 16 Grassi F., Labra M., Imazio S., Spada A., Sgorbati S., Scienza A., Sala F.. Evidence of a secondary grapevine domestication centre detected by SSR analysis. Theoretical and Applied Genetics. (2003); 107 1315-1320
- 17 Grassi F., Labra M., Scienza A., Imazio S.. Chloroplast SSR analysis to assess DNA diversity in wild and cultivated grapevine. Vitis. (2002); 41 157-158
- 18 Hegi G.. Illustrierte Flora von Mitteleuropa. München; Karl Hansen Verlag (1925)
- 19 Horandl E., Greilhuber J., Dobes C.. Isozyme variation and ploidy levels within the apomictic Ranunculus auricomus complex: evidence for a sexual progenitor species in southeastern Austria. Plant Biology. (2000); 2 53-62
- 20 Karp A., Peter G., Ingram I., Ingram D.. Molecular Tools for Screening Biodiversity. London; Published by Chapman and Hall (1998)
- 21 Labra M., Carreno-Sanchez E., Bardini M., Basso B., Sala F., Scienza A.. Extraction and purification of DNA from grapevine leaves. Vitis. (2001); 40 101-102
- 22 Lacerda D. R., Acedo M. D. P., Filho J. P., Lemos F., Lovato M. B.. Genetic diversity and structure of natural populations of Plathymenia reticulata (Mimosoideae), a tropical tree from the Brazilian Cerrado. Molecular Ecology. (2001); 10 1143-1152
- 23 Levadoux L.. Les population sauvages et cultivèes de Vitis vinifera. . Annales de l'Amelioration des Plantès Cultivées. (1956); 6 59-110
- 24 McCauley D. M.. The use of chlorplast DNA polymorphism in studies of gene flow in plants. Trends Ecology and Evolution. (1995); 10 198-202
- 25 Nei M.. Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. USA. (1973); 70 3321-3323
- 26 Nei M.. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics. (1978); 89 583-590
- 27 Núñez D. R., Walker M. J.. A review of paleobotanical findings of early Vitis in the Mediterranean and of the origin of cultivated grape-vines, with special reference to new pointers to prehistoric exploitation in the western Mediterranean. Paleobot. Palynol.. (1989); 61 205-237
- 28 Ocete R., Cantos M., Lopez M. A., Gomez I., Troncoso A.. Wild grapevine populations in the Ossa-Morena mountain range (Portugal - Spain): location, characterization and sanitary state. Vitis. (2002); 41 55-56
- 29 Ocete R., López Martínez M. A., Pérez Izquierdo A., Del Tío M. R.. Las poblaciones españolas de vid silvestre. Monografías INIA: agrícola n. 3. Madrid, Spain: Ministerio de Agricoltura, pesca y alimentación. (1999)
-
30 Olmo H. P..
The origin and domestication of the Vitis vinifera grape. McGovern, P. E., Fleming, S. J., and Katz, S. H., eds. The Origin and Ancient History of Wine. Luxembourg; Gordon and Breach Publishers (1995) - 31 Page R. D. M.. TreeView: An application to display phylogenetic trees on personal computers. Computer Applications in the Biological Sciences. (1996); 12 357-358
- 32 Powell W., Morgante M., McDevitt R., Vendramin G. G., Rafalski J. A.. Polymorphic simple sequence repeat regions in chloroplast genomes: Applications to the population genetics of Pines. Proceedings in Natural Academy Science, USA. (1995); 99 7759-7763
- 33 Raymond M., Rousset F.. Genepop (version 1.2), a population genetics software for exact tests and ecumenicism. Journal of Heredity. (1995); 86 248-249
- 34 Slatkin M.. Gene flow and the geographic structure of natural populations. Science. (1987); 236 787-792
- 35 Slatkin M., Barton N.. A comparison of three indirect methods for estimating average levels of gene flow. Evolution. (1989); 43 1349-1368
-
36 Soulè M. E..
Thresholds for survival: maintaining fitness and evolutionary potential. Soulè, M. E. and Wilcox, B. A., eds. Conservation Biology: An Evolutionary-Ecological Approach. Sunderland, MA; Sinauer Associates (1980): 151-169 - 37 Thomas M., Scott N. S.. Microsatellite repeats in grapevine reveal DNA polymorphisms when analysed as sequenced-tagged site (STSs). Theoretical and Applied Genetic. (1993); 86 985-990
- 38 Weir B. S., Cockerham C. C.. Estimating F-statistics for the analysis of population structure. Evolution. (1984); 38 1358-1370
- 39 Weising K., Gardner R.. A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms. Genome. (1999); 42 9-19
- 40 Wright S.. Evolution and Genetics of Populations. Variability Within and Among Natural Populations, Vol. 4. Chicago, IL; University of Chicago Press (1978)
- 41 Yeh F. C., Yang R. C., Boyle T.. POPGENE. CIFOR, Version 1.21. Canada; University of Alberta (1997)
F. Grassi
Dip. Biologia, Sez. Botanica Generale
University of Milan
Via Celoria 26
20133 Milano
Italy
Email: fabrizio.grassi@unimi.it
Section Editor: F. Salamini