Synthesis of Nepetoidin B

Abstract

The first synthesis of nepetoidin B in an overall yield of 17% was achieved in two steps through Baeyer–Villiger oxidation of commercially available 1,5-bis(3,4-dimethoxyphenyl)-1,4-pentadien-3-one with oxone to produce the tetramethylated nepetoidin B, followed by demethylation using boron tribromide.

 

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Key words

Baeyer–Villiger oxidation - demethylation - medicinal chemistry - natural products

Nepetoidin B (1) was initially isolated from Plectranthus caninus in 1975 as the (Z,E)-1 isomer (Figure [1]).[1] Since then, (Z,E)- 1 and its corresponding stereoisomer, (E,E)-1, have been isolated from a variety of plant species using solvent extraction and chromatographic purification.[2–31]. The amounts of (Z,E)-1 and (E,E)-1 vary from 9:1 to 1:1 in different plants,[1] [10] where the stereochemistry of the two isomers has historically been elucidated based on the analyses of J-coupling constants from NMR spectroscopic data.[1] [2] [3] [4] [5] [6] [7] [8] [9] [12] [15] [16] [17] [18] [19] [20]

Nepetoidin’s level in plants is rather low; in a recent isolation from 100 kg of Salvia miltiorrhiza Bunge (Danshen), extraction and purification yielded just 37 mg.[27] Based on the genes, enzymes, and metabolites that have been associated with nepetoidin B, several mechanisms have been proposed for its biosynthesis: (1) condensation of the enol form of dopaldehyde with caffeic acid;[1] [5] [15] [19] (2) oxidative decarboxylation of rosmarinic acid, from which stereo­specific loss of the pro-R or pro-S methylene proton during this process would result in the formation of (Z,E)-1 or (E,E)-1;[21] [25] and (3) decarboxylation of p-hydroxyphenyl­pyruvic acid and subsequent esterification with the enol form of 3,4-dihydroxyphenylacetaldehyde.[25]

Several studies have demonstrated potential biological applications for 1: it has shown antibacterial, antifungal, and free-radical scavenging properties, and it could be used as a chemotaxonomic marker.[8] [9] [10] [12] [15] [30] [31] Furthermore, 1 is an inhibitor of xanthine oxidase and thus could help to regulate hyperuricemia in human gout,[12] as well as inhibit the production of nitric oxide, which is stimulated by bacterial lipopolysaccharide.[27] Surprisingly, in spite of its medicinal characteristics, there has been no reported synthesis of 1 to date. The commercial price of nepetoidin B varies from about $150/mg to about $5,000/g, a price prohibitive to its use in research studies. In continuation of our work on the production of bioproducts from biomass, especially with regard to nepetoidin B and its potential incorporation into lignin in plant cell walls, we sought to design a synthetic route for its production.[32]

Figure 1 The two naturally occurring isomers of nepetoidin B, (Z,E)-1 and (E,E)-1, isolated from plants

Herein, we report the first synthesis of nepetoidin B. Our synthetic route (Scheme [1]) began with Baeyer–Villiger oxidation of commercially available 1,5-bis(3,4-dimethoxyphenyl)-1,4-pentadien-3-one (2) with oxone, based on a reported procedure for the transformation of α,β-unsaturated ketones into their corresponding vinyl acetates.[33] We optimized the reaction conditions for the stereospecific transformation of only one of the two symmetrical α,β-unsaturated ketones into its corresponding vinyl acetate; our final conditions afforded tetramethylated nepetoidin B [(E,E)-3 isomer] in an isolated yield of 40% from 2, with the starting material being recovered in an isolated yield of 37% (i.e., the overall conversion of starting material to product was about 63%). It is interesting to note that we did not observe iso­merization of (E,E)-3 to (Z,E)-3 during the Baeyer–Villiger oxidation of 2. After optimizing the demethylation of 3 ­using boron tribromide, we obtained 1 in an isolated yield of 43%, thus completing our two-step synthesis of nepetoidin B in an overall yield of 17% (33% when the recovery of starting compound 2 is taken into account).

Scheme 1 Synthesis of nepetoidin B

Synthetic nepetoidin B was obtained as a mixture of the two isomers in a ratio of 94:6 (E,E)-1/(Z,E)-1 (as estimated by ¹H NMR analysis; Figures S1 and S2 in the Supporting ­Information). Considering that the (E,E)-1 isomer was the predominant product in our synthesis, it appears to be the thermodynamically favored isomer. The mixture of the isomers of nepetoidin B [(E,E)-1 94% and (Z,E)-1 6%] was separated by HPLC.[34]

In conclusion, we have described the first synthesis of nepetoidin B. Currently, commercial sources charge about $5,000/g for the product, and so we expect that this convenient synthesis could allow for nepetoidin B to be manufactured at a significantly reduced cost of about $500/g. Its ­potential value as a medicinal compound would seem to make this a worthwhile venture.

 

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Acknowledgment

The authors are grateful to Justin Mobley for discussion regarding the Baeyer–Villiger oxidation conditions and Steven D. Karlen for help in separating the isomers of nepetoidin B.

• References and Notes

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• 34 Synthesis of 2-(3,4-Dihydroxyphenyl)ethenyl-3-(3,4-dihydroxyphenyl)-2-propenoate (1) To a stirred solution of (E,E)-3 (1.341 g, 3.620 mmol, 1.0 equiv) in dry CH₂Cl₂ (20 mL) under argon was added neat BBr₃ (2.09 mL, 21.722 mmol, 6.0 equiv) dropwise at −78 °C. The solution was stirred at the same temperature for another 30 min, at which point the mixture was allowed to warm to 0 °C over the course of 1 h, and then to warm to r.t. over the course of 1 h. After once again cooling the mixture to −78 °C, it was quenched by addition of saturated aqueous NaHCO₃ (18 mL) and then allowed to warm to r.t. over 20 min. The mixture was partitioned between EtOAc (120 mL) and H₂O (150 mL), and the aqueous layer was extracted with EtOAc (2 x 50 mL). The combined organic layers were washed with brine (50 mL), then dried over anhydrous Na₂SO₄, and the solution was concentrated in vacuo. The residue was purified by flash column chromatography on silica gel (MeOH/CH₂Cl₂ 10:90) to furnish nepetoidin B, compound 1, as a yellow solid (490 mg, 43%). R_f = 0.58 (MeOH/CH₂Cl₂ 15:85). The ratio of isomers (E,E)-1/(Z,E)-1 is 94:6, as determined by ¹H NMR spectroscopic analysis (signals at 5.67 (d, J = 7.4 Hz, H-7) and 6.36 (d, J = 15.8 Hz, H-8) for the (Z,E)-1 and (E,E)-1 isomers, respectively). HPLC Separation of the Isomers of Nepetoidin B [(E,E)-1 and (Z,E)-1] The mixture of the isomers of nepetoidin B [(E,E)-1 94% and (Z,E)-1 6%] obtained from the demethylation of (E,E)-3 was separated by HPLC. To collect a sufficient quantity for ¹H and ¹³C NMR analysis, 1 (12 mg) was dissolved in MeOH (350 μL), and the method described above was run five times using 50 μL injections of the solution. The appropriate fractions were combined and concentrated in vacuo to afford each purified isomer for further analysis. (E,E)-1 (7 mg): ¹H NMR (500 MHz, acetone-d ₆): δ_H = 6.36 (d, J = 15.8 Hz, H-8), 6.38 (d, J = 12.8 Hz, H-7'), 6.77−6.78 (m, H-6' and H-5), 6.89 (d, J = 8.2 Hz, H-5'), 6.93 (d, J = 1.8 Hz, H-2), 7.11 (dd, J = 8.2, 2.1 Hz, H-6), 7.22 (d, J = 2.1 Hz, H-2'), 7.68 (d, J = 15.9 Hz, H-7), 7.81 (d, J = 12.8 Hz, H-8'), 8.21 (br. s, 4 x OH). The obtained NMR spectroscopic data for (E,E)-1 matched literature values.^10,15,19 (Z,E)-1 (0.3 mg): ¹H NMR (500 MHz, acetone-d ₆): δ_H = 5.67 (d, J = 7.4 Hz, H-7'), 6.51 (d, J = 15.9 Hz, H-8), 6.81 (d, J = 8.2 Hz, H-5'), 6.90 (d, J = 8.2 Hz, H-5), 7.00 (dd, J = 8.2, 2.1 Hz, H-6'), 7.13 (dd, J = 8.2, 2.1 Hz, H-6), 7.26 (d, J = 2.0 Hz, H-2), 7.26 (d, J = 7.3 Hz, H-8'), 7.37 (d, J = 2.1 Hz, H-2'), 7.73 (d, J = 15.9 Hz, H-7), 8.05 (br. s, 4 x OH).^{1,10,15,19,30}