Key words ligation - hydroxylamines - acetals - amides - peptides
In 2006, we reported the α-ketoacid–hydroxylamine (KAHA) amide-forming ligation,[1 ] which complemented the well-established native chemical ligation[2 ] (NCL) for the chemical synthesis of proteins. These methods allow chemoselective
couplings of unprotected peptide segments for the synthesis of peptides and proteins.[3 ] Currently the most used hydroxylamine for KAHA ligations is 5-oxaproline, due to
its high stability and chemoselective reactivity with α-ketoacids to form a homoserine
residue at the ligation site.[4 ] The primary product of this reaction is an ester, which rearranges to an amide under
basic conditions (Scheme [1 ]).[5 ] In 2015, we developed a novel oxazetidine acid which gave serine at the ligation
site, exclusively as the amide product.[6 ] Unfortunately, the synthesis of this monomer is rather long and it is not stable
in its unprotected form.
Scheme 1 KAHA ligation with 5-oxaproline and proposed cyclic serine hydroxylamine
In this report, we describe the synthesis of a six-membered cyclic hydroxylamine,
which directly yields a native serine residue at the ligation site (Scheme [1 ]). Furthermore, we describe our efforts to incorporate these novel monomers into
a peptide segment.
In designing an alternative, serine-forming ligation monomer we sought to identify
a larger ring structure that we hoped would be more easily prepared. This consideration
led us to consider cyclic variants of l -serine hydroxylamine, including cyclic carbonates, cyclic sulfonates, and cyclic
acetals. To begin, l -serine was converted into the corresponding ethyl ester 1 . TBS protection of the free alcohol and subsequent treatment with bromoacetonitrile
in the presence of a base gave 2 .
This was treated with a slightly modified protocol from Fukuyama to give the N -hydroxyl intermediate 3 .[7 ] Initially we envisioned selective Boc-protection of the nitrogen, but this was unsuccessful
under various conditions.[8 ] We instead elected to first protect the free hydroxyl group using TBSCl followed
by N-protection with Fmoc-Cl to give 4 . Although initial attempts to remove the TBS protecting group using TBAF led mainly
to decomposition, treatment of 4 with concentrated HCl gave clean conversion into diol 5 (Scheme [2 ]).
Scheme 2 Synthesis of core structure 5
We explored the formation of the corresponding cyclic boronic esters, silanes, carbonates,
sulfites, and phosphoric acid esters; however, we were not able to isolate the corresponding
six-membered cyclic hydroxylamines. As an alternative, we considered cyclic acetals,
as similar structures have proven to be well suited for KAHA ligation.[9 ] For use in protein synthesis, however, these acid-labile functional groups would
need to survive cleavage from the resin under standard TFA conditions. Prior to in-depth
investigations of suitable acetals, we carried out preliminary tests to check that
cyclic acetals of 5 could be formed and that Fmoc-removal was feasible. We treated compound 5 with 1,1-dimethoxyethylbenzene in the presence of p -toluenesulfonic acid to give 6 without problem. Removal of the Fmoc group under basic conditions also proceeded
smoothly. With this promising result we sought to prepare and evaluate various cyclic
acetals.
Table 1 Synthesized Monomers and Their Stabilitya
Monomer
Stability to SPPS cleavage conditions
6
not stable
7
not stable
8
not stable
9
not stable
10
not stable
11
not stable
12
stable
a Stability was tested by treatment with TFA/DODT/H2 O (95:2.5:2.5 v/v) for 2 h.
We initially targeted a methylene acetal, as these are known to be more resistant
to acid cleavage than other structures.[10 ] Unfortunately, all attempts to form the desired compound from 5 with various methylene sources using different catalysts or activation using Brønsted
or Lewis acids did not yield the desired product. Despite this setback, we continued
to synthesize various acetals and ketals by using either a catalytic amount of p -toluenesulfonic acid for aldehyde-derived compounds, or In(OTf)3 for the ketone derivatives. Selected acetals and ketals prepared are shown in Table
[1 ]. However, when these compounds were tested for their stability under SPPS conditions
[resin cleavage conditions, TFA/DODT/H2 O (95:2.5:2.5 v/v) for 2 h], only cyclobutanone-derivative 12 showed reasonable stability (Table [1 ]).
Despite the poor acid stability, we tested these substrates for activity in KAHA ligation.
For this purpose, the Fmoc protecting group was removed with piperidine and the monomers
were allowed to react with simple α-ketoacid 13 to give amide 14 (Table [2 ]). Commonly reported KAHA conditions use DMSO/H2 O at 60 °C, but a HFIP/AcOH mixture showed much better solubility and the reaction
was observed to proceed at 45 °C.[11 ] Therefore all ligation studies were carried out under these conditions. Almost all
monomers tested showed good activity in the KAHA ligation. After a period of 12 hours,
α-ketoacid 13 was consumed. The benzylic acetals were stable under the acidic ligation conditions,
and electron-poor nitrobenzyl acetal 16 gave slightly better conversion compared to bromobenzyl acetal 15 .
Table 2 KAHA Ligation with Selected Monomersa
Monomer
Ligation yield after purification
15
64%
16
77%
17
no product observed
18
72%
monomer 16
b
monomer 18
c
a KAHA ligation carried out at 30 mM at 45 °C in HFIP/AcOH with 1% H2 O for 12 h.
b HPLC monitoring of the KAHA ligation of α-ketoacid 13 and hydroxylamine 16 , and purified amide 14 .
c HPLC monitoring of the KAHA ligation of α-ketoacid 13 and hydroxylamine 18 , and purified amide 14 .
Cyclobutanone-derived acetal 18 was also stable during the ligation conditions and gave good conversion of the α-ketoacid.
Only 17 did not perform KAHA ligation under HFIP/AcOH conditions because the deprotected
monomer was not stable under the ligation conditions (Table [2 ]).
This experiment also indicated that open, unsubstituted serine hydroxylamine does
not react under these conditions and that the cyclic structure is essential. With
these promising results, we sought to remove the ethyl ester in the presence of Fmoc
and the acetal, for the purpose of applying this monomer in Fmoc-SPPS. Despite all
our efforts, the various conditions only led to total decomposition or returned starting
material without removing the Fmoc protecting group.
We instead introduced a benzyl ester at the beginning of the synthesis. All previously
developed steps were compatible with the benzyl-protected starting material, and we
were able to synthesize the benzyl ester analogue 19 . Unfortunately, deprotection of the benzyl ester using Pd/C under a H2 atmosphere gave mainly decomposition and only traces of product was observed. We
were pleased to see that exchanging Pd/C for Pd(OH)2 allowed a clean reaction.
Free acid 26 was coupled onto a short peptide segment, but proved not to be stable upon resin
cleavage. Therefore we prepared and evaluated a number of other ketals from small
rings. Although we were not successful in forming the product from oxetan-3-one, other
cyclobutanone derivatives proved tractable. Brominated derivative 20 was readily formed and carboxylic esters 21 and 22 could be prepared from the corresponding acid followed by ester formation. The stability
of compounds 19 –22 was tested on the monomer and on a peptide segment (Table [3 ]).
Table 3 Synthesized Monomers and Their Stabilitya
Monomer
Stability to SPPS cleavage conditions
Stability to SPPS cleavage conditions on peptide
19
stable
not stable
20
stable
stable
21
stable
stable
22
stableb
stableb
a Stability was tested by treatment with TFA/DODT/H2 O (95:2.5:2.5 v/v) for 2 h.
b Observed as free acid on the cyclobutane ring.
All benzyl-protected monomers were also tested for their performance in the KAHA ligation.
Fmoc removal occurred smoothly in all cases and the deprotected monomers underwent
ligation with α-ketoacid 13 in HFIP/AcOH (Table [4 ]). The cyclobutanone ketal monomers could be converted into the corresponding acid
by treatment with Pd(OH)2 under H2 atmosphere (Scheme [3 ]) and all compounds tolerated the coupling conditions to introduce the monomer onto
the N-terminus of a peptide segment. Since OMe ester 21 showed better conversion in the KAHA ligation, we selected this monomer for introduction
onto a short peptide sequence.
Table 4 KAHA Ligation with Selected Monomersa
Monomer
Ligation yield after purification
24
79%
25
39%
13 and 24
b
13 and 25
c
a KAHA ligation carried out at 30 mM at 45 °C in HFIP/AcOH with 1% H2 O for 12 h.
b HPLC monitoring of the KAHA ligation of α-ketoacid 13 and hydroxylamine 24 , and purified amide 23 .
c HPLC monitoring of the KAHA ligation of α-ketoacid 13 and hydroxylamine 25 , and purified amide 23 .
Scheme 3 Benzyl deprotection
A short peptide segment with three amino acid residues, prepared by standard SPPS
conditions on a Rink amide resin, was chosen as a model peptide. After deprotection
of the terminal amine, the free acid of monomer 27 was coupled with HATU/NMM conditions to the resin and cleaved with TFA/DODT/H2 O (95:2.5:2.5 v/v) for 2 hours. TFA was removed at 40 °C under reduced pressure and
the product was isolated by preparative HPLC. The Fmoc protecting group was removed
with N ,N -diethylamine and the KAHA ligation performed directly on the unprotected product
without further purification using α-ketoacid 13 in HFIP/AcOH. The free hydroxylamine 31 was observed by LCMS and was completely consumed within 12 hours (Scheme [4 ]).
Scheme 4 Ligation test on a small peptide segment
After this positive result, we expanded to a larger peptide fragment consisting of
50 amino acid residues. Although the Fmoc group could be removed cleanly, with a peak-to-peak
conversion by HPLC, the acetal protecting group unfortunately did not survive the
two-step procedure of basic Fmoc-removal conditions and acidic purification. The obtained
product was 36 , the free hydroxylamine of serine at the N-terminus (Scheme [5 ]).
Scheme 5 Attempts to remove the Fmoc protecting group on a longer peptide fragment
The results were the same regardless of the choice of base used to remove the Fmoc
protecting group, including basic aqueous solutions. To date, we were not able to
overcome this problem and longer peptides containing the cyclic ketal serine hydroxylamines
cannot be isolated. A search for a more stable acetal protecting group is currently
under investigation.
In conclusion, we devised a synthetic route to new hydroxylamine monomers that yield
serine residues upon KAHA ligation. We found that substituted cyclobutane ketals are
stable under acidic conditions and are excellent ligation partners. Further investigations
are necessary to apply this monomer on larger peptides, however this strategy provides
a promising new approach to KAHA ligation that forms canonical amino acid residues
at the ligation site.
Fmoc-amino acids with suitable side-chain protecting groups, HATU (1-[bis(dimethylamino)methylene]-1H -1,2,3-triazolo[4,5-b ]pyridinium 3-oxide hexafluorophosphate) were purchased from Peptides International
(Louisville, KY, USA) and ChemImpex (Wood Dale, IL, USA). Solvents for flash chromatography
(EtOAc, hexanes, MeOH) were of technical grade and distilled prior to use. HPLC grade
MeCN from Sigma-Aldrich was used for analytical and preparative HPLC purification.
DMF (>99.8%) from Sigma-Aldrich was directly used without further purification for
solid phase peptide synthesis. Other commercially available reagents and solvents
were purchased from Sigma-Aldrich (Buchs, Switzerland), Acros Organics (Geel, Belgium),
and TCI Europe (Zwijndrecht, Belgium). DODT = 2,2′-(ethylenedioxy)diethanethiol. 1 H and 13 C NMR spectra were recorded on Bruker DRX400, Bruker AVIII400 and Bruker AVIII600
spectrometers. HRMS were recorded by the Mass Service of the Laboratory of Organic
Chemistry at ETH Zurich either with a Bruker maXis instrument (ESI-MS measurements)
equipped with an ESI source and a Qq-TOF detector or with a Bruker solariX instrument
(MALDI-FTICR-MS) using 4-hydroxy-α-cyanocinnamic acid as matrix. All reactions were
performed using standard techniques under an atmosphere of N2 . Reactions and fractions from flash chromatography were monitored by TLC using aluminum
plates (Merck, TLC Silica gel 60 W F254 s) and visualized by staining with basic KMnO4 solution or acidic ninhydrin solution. Flash chromatography was performed on Silicycle
SiO2 Type F60 (230–400 mesh) using a forced flow of air at 0.5–1.0 bar. Unless otherwise
stated, peptides and protein segments were analyzed and purified by RP-HPLC on Jasco
analytical and preparative instruments equipped with dual pumps, mixer and in-line
degasser, a variable wavelength UV detector (simultaneous monitoring of the eluent
at 220 nm, 254 nm, and 301 nm) and a Rheodyne injector fitted with a 20 or 1000 μL
injection loop. If required, the columns were heated using a column heater or a water
bath (preparative HPLC). The mobile phase for RP-HPLC was Milipore-H2 O containing 0.1% (v/v) TFA and HPLC grade MeCN containing 0.1% (v/v) TFA. Analytical
HPLC was performed on Shiseido Capcell Pak C18 MGII (5 μm, 4.6 mm i.d. × 250 mm) or
Shiseido Capcell Pak C18 (UG 80, 5 μm, 4.6 mm i.d. × 250 mm) columns at a flow rate
of 1 mL/min. Preparative HPLC was performed on Shiseido Capcell Pak MGII (5 μm, 20
mm i.d. × 250 mm) or Vydac 248MS C18 (10 μm, 22 mm i.d. × 250 mm) columns at a flow
rate of 10 mL/min.
Ethyl O -(tert -Butyldimethylsilyl)-N -(cyanomethyl)-l -serinate (2)
Ethyl O -(tert -Butyldimethylsilyl)-N -(cyanomethyl)-l -serinate (2)
IR (neat): 2954, 2930, 2857, 1733, 1471, 1251, 1195 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 4.19 (q, J = 7.1 Hz, 2 H), 3.92–3.84 (m, 2 H), 3.80–3.59 (m, 2 H), 3.48 (dt, J = 8.2, 4.4 Hz, 1 H), 2.28 (q, J = 7.0 Hz, 1 H), 1.27 (t, J = 7.2 Hz, 3 H), 0.85 (s, 9 H), 0.03 (d, J = 5.7 Hz, 6 H).
13 C NMR (101 MHz, CDCl3 ): δ = 171.54 (CO), 117.73 (CN), 64.41 (CH2 ), 61.61 (CH), 61.39 (CH2 ), 36.07 (CH2 ), 25.82 (3 CH3 ), 18.27 (C), 14.29 (CH3 ), –5.41 (CH3 ), –5.55 (CH3 ).
HRMS (ESI): m /z [M + H]+ calcd for C13 H27 N2 O3 Si: 287.1785; found: 287.1786.
Ethyl O -(tert -Butyldimethylsilyl)-N -hydroxy-l -serinate (3)
Ethyl O -(tert -Butyldimethylsilyl)-N -hydroxy-l -serinate (3)
IR (neat): 2953, 2929, 2857, 1737, 1471, 1252, 1107 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 6.59 (br s, 1 H), 5.83 (br s, 1 H), 4.21 (qd, J = 7.2, 0.8 Hz, 2 H), 3.88 (qd, J = 10.2, 4.8 Hz, 2 H), 3.74 (dd, J = 5.6, 4.0 Hz, 1 H), 1.27 (t, J = 7.1 Hz, 3 H), 0.85 (s, 9 H), 0.03 (d, J = 3.3 Hz, 6 H).
13 C NMR (101 MHz, CDCl3 ): δ = 171.21 (CO), 66.83 (CH), 61.21 (CH2 ), 61.08 (CH2 ), 25.85 (3 CH3 ), 18.29 (C), 14.31 (CH3 ), –5.46 (CH3 ), –5.53 (CH3 ).
HRMS (ESI): m /z [M + H]+ calcd for C11 H26 NO4 Si: 264.1626; found: 264.1627.
Ethyl N -(tert -Butyldimethylsiloxy)-O -(tert -butyldimethylsilyl)-N -[(9H -fluoren-9-ylmethoxy)carbonyl]-l -serinate (4)
Ethyl N -(tert -Butyldimethylsiloxy)-O -(tert -butyldimethylsilyl)-N -[(9H -fluoren-9-ylmethoxy)carbonyl]-l -serinate (4)
IR (neat): 2953, 2928, 2856, 1738, 1463, 1249, 1095 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.79 (dt, J = 7.6, 0.9 Hz, 2 H), 7.69 (dt, J = 7.5, 1.0 Hz, 2 H), 7.42 (tt, J = 7.5, 0.8 Hz, 2 H), 7.32 (tt, J = 7.4, 1.1 Hz, 2 H), 4.72 (dd, J = 7.9, 6.3 Hz, 1 H), 4.55–4.39 (m, 2 H), 4.31 (t, J = 7.1 Hz, 1 H), 4.21 (qd, J = 7.1, 3.2 Hz, 2 H), 4.10 (dd, J = 7.2, 1.8 Hz, 2 H), 1.28 (t, J = 7.1 Hz, 3 H), 0.96 (s, 9 H), 0.91 (s, 9 H), 0.21 (d, J = 22.0 Hz, 6 H), 0.09 (s, 6 H).
13 C NMR (101 MHz, CDCl3 ): δ = 168.68 (CO), 159.38 (CO), 143.89 (C), 143.82 (C), 141.44 (C), 141.42 (C), 127.87
(CH), 127.86 (CH), 127.21 (2 CH), 125.49 (CH), 125.43 (CH), 120.10 (CH), 120.09 (CH),
68.36 (CH2 ), 66.93 (CH), 61.45 (CH2 ), 59.85 (CH2 ), 47.13 (CH), 26.09 (3 CH3 ), 26.00 (3 CH3 ), 18.41 (2 C), 14.32 (CH3 ), –4.70 (CH3 ), –4.73 (CH3 ), –5.21 (CH3 ), –5.29 (CH3 ).
HRMS (ESI): m /z [M + H]+ calcd for C32 H50 NO6 Si2 : 600.3171; found: 600.3174.
Ethyl N -[(9H -Fluoren-9-ylmethoxy)carbonyl]-N -hydroxy-l -serinate (5)
Ethyl N -[(9H -Fluoren-9-ylmethoxy)carbonyl]-N -hydroxy-l -serinate (5)
IR (neat): 2956, 1730, 1700, 1450, 1312, 1111, 1047 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.78 (dt, J = 7.6, 1.0 Hz, 2 H), 7.62 (t, J = 6.2 Hz, 2 H), 7.42 (tt, J = 7.5, 1.3 Hz, 2 H), 7.36–7.29 (m, 2 H), 4.86 (s, 1 H), 4.57–4.42 (m, 2 H), 4.35–4.21
(m, 3 H), 4.21–4.06 (m, 3 H), 2.74 (s, 1 H), 1.29 (td, J = 7.1, 5.9 Hz, 3 H).
13 C NMR (101 MHz, CDCl3 ): δ = 158.33 (CO), 143.54 (2 C)*, 143.48 (2 C), 141.43 (2 C)*, 141.43 (2 C), 128.02
(2 CH)*, 128.02 (2 CH), 127.32 (2 CH)*, 127.30 (2 CH), 125.25 (2 CH)*, 125.20 (2 CH),
120.19 (2 CH), 69.06 (CH2 ), 64.07 (CH), 62.29 (CH2 ), 60.57 (CH2 ), 47.02 (CH), 14.35 (CH3 )*, 14.26 (CH3 ); * signals of rotamers.
HRMS (MALDI): m /z [M + Na]+ calcd for C20 H21 NO6 Na: 394.1261; found: 394.1261.
Benzyl O -(tert -Butyldimethylsilyl)-N -(cyanomethyl)-l -serinate (benzyl-2)
Benzyl O -(tert -Butyldimethylsilyl)-N -(cyanomethyl)-l -serinate (benzyl-2)
IR (neat): 3674, 2987, 2956, 1736, 1463, 1406, 1252, 1083 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.40–7.31 (m, 5 H), 5.19 (s, 2 H), 3.97–3.87 (m, 2 H), 3.81–3.71 (m, 1 H),
3.71–3.53 (m, 2 H), 2.31 (br s, 1 H), 0.86 (s, 9 H), 0.02 (d, J = 10.2 Hz, 6 H).
13 C NMR (101 MHz, CDCl3 ): δ = 171.48 (CO), 135.39 (C), 128.76 (2 CH), 128.60 (CH), 128.49 (2 CH), 117.71
(CN), 67.17 (CH2 ), 64.37 (CH2 ), 61.68 (CH), 36.07 (CH2 ), 25.85 (3 CH3 ), 18.29 (C), –5.40 (CH3 ), –5.51 (CH3 ).
HRMS (ESI): m /z [M + Na]+ calcd for C18 H28 N2 NaO3 Si: 371.1761 found 371.1761.
Benzyl O -(tert -Butyldimethylsilyl)-N -hydroxy-l -serinate (benzyl-3)
Benzyl O -(tert -Butyldimethylsilyl)-N -hydroxy-l -serinate (benzyl-3)
IR (neat): 3674, 2987, 2900, 1739, 1462, 1252, 1192, 1105, 1066 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.40–7.29 (m, 5 H), 5.87 (br s, 1 H), 5.58 (br s, 1 H), 5.21 (s, 2 H), 3.97–3.87
(m, 2 H), 3.81 (dd, J = 5.2, 4.1 Hz, 1 H), 0.86 (s, 9 H), 0.03 (s, 3 H), 0.02 (s, 3 H).
13 C NMR (101 MHz, CDCl3 ): δ = 171.19 (CO), 135.58 (C), 128.74 (2 CH), 128.52 (CH), 128.41 (2 CH), 66.97 (CH2 ), 66.90 (CH), 61.18 (CH2 ), 25.89 (3 CH3 ), 18.33 (C), –5.43 (CH3 ), –5.48 (CH3 ).
HRMS (ESI): m /z [M + H]+ calcd for C16 H28 NO4 Si: 326.1782; found: 326.1779.
Benzyl N -(tert -Butyldimethylsiloxy)-O -(tert -butyldimethylsilyl)-N -[(9H -fluoren-9-ylmethoxy)carbonyl]-l -serinate (benzyl-4)
Benzyl N -(tert -Butyldimethylsiloxy)-O -(tert -butyldimethylsilyl)-N -[(9H -fluoren-9-ylmethoxy)carbonyl]-l -serinate (benzyl-4)
IR (neat): 3674, 2956, 1740, 1450, 1361, 1250, 1098, 1076, 1005 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.75 (dq, J = 7.5, 0.9 Hz, 2 H), 7.63–7.59 (m, 2 H), 7.46–7.18 (m, 9 H), 5.23–5.10 (m, 2 H),
4.71 (dd, J = 7.6, 6.5 Hz, 1 H), 4.49–4.35 (m, 2 H), 4.19 (t, J = 7.0 Hz, 1 H), 4.14–4.07 (m, 2 H), 0.93 (s, 9 H), 0.88 (s, 9 H), 0.20 (s, 3 H),
0.15 (s, 3 H), 0.07 (s, 3 H), 0.06 (s, 3 H).
13 C NMR (101 MHz, CDCl3 ): δ = 168.55 (CO), 159.37 (CO), 143.85 (2 C)*, 143.78 (2 C), 141.41 (2 C)*, 141.38
(2 C), 135.47 (C), 128.62 (2 CH), 128.36 (CH), 128.27 (2 CH), 127.82 (2 CH)*, 127.80
(2 CH), 127.19 (2 CH), 125.40 (2 CH)*, 125.35 (2 CH), 120.06 (2 CH)*, 120.04 (2 CH),
68.29 (CH2 ), 67.16 (CH), 67.08 (CH2 ), 59.96 (CH2 ), 47.08 (CH), 26.08 (3 CH3 ), 25.99 (3 CH3 ), 18.39 (C), 18.37 (C), –4.74 (2 CH3 ), –5.23 (CH3 ), –5.30 (CH3 ); * signals of rotamers.
HRMS (ESI): m /z [M + H]+ calcd for C37 H52 NO6 Si2 : 662.3328; found: 662.3323.
Benzyl N -[(9H -Fluoren-9-ylmethoxy)carbonyl]-N -hydroxy-l -serinate (benzyl-5)
Benzyl N -[(9H -Fluoren-9-ylmethoxy)carbonyl]-N -hydroxy-l -serinate (benzyl-5)
IR (neat): 3674, 3305, 2969, 2900, 1738, 1708, 1450, 1262, 1106, 1048 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.73 (ddt, J = 7.6, 2.1, 0.9 Hz, 2 H), 7.53 (t, J = 8.3 Hz, 2 H), 7.37 (tdt, J = 7.5, 3.3, 0.8 Hz, 2 H), 7.35–7.17 (m, 7 H), 5.18 (s, 2 H), 4.88 (br s, 1 H), 4.47–4.34
(m, 2 H), 4.22–4.07 (m, 3 H), 3.13 (br s, 1 H); 1 H not observed.
13 C NMR (101 MHz, CDCl3 ): δ = 168.65 (CO), 158.95 (CO), 143.39 (2 C), 141.37 (2 C), 134.97 (C), 128.76 (2
CH), 128.65 (CH), 128.22 (2 CH), 127.99 (2 CH)*, 127.97 (2 CH), 127.31 (2 CH)*, 127.29
(2 CH), 125.21 (2 CH)*, 125.16 (2 CH), 120.14 (2 CH), 69.16 (CH2 ), 67.70 (CH2 ), 64.31 (CH), 59.96 (CH2 ), 46.91 (CH); * signals of rotamers.
HRMS (ESI): m /z [M + Na]+ calcd for C25 H23 NNaO6 : 456.1418; found: 456.1419.
Ketal Formation with In(OTf)3 ; General Procedure
Ketal Formation with In(OTf)3 ; General Procedure
In(OTf)3 (0.30 equiv) was added to a solution of 5 (1.00 equiv) and ketone (5.00 equiv) in CH2 Cl2 (0.15 M) at 0 °C. The reaction was allowed to warm up to r.t. and was stirred overnight.
The solution was diluted with CH2 Cl2 and 10% citric acid solution was added. The phases were separated and the aqueous
layer was extracted with CH2 Cl2 (2 ×). The combined organic layers were washed with sat. aq NaHCO3 solution and brine and dried (Na2 SO4 ). The drying agent was removed by filtration and the solvent was evaporated. The
residue was purified by flash chromatography.
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-Methyl-6-phenyl-1,5,2-dioxazinane-2,3-dicarboxylate (6)
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-Methyl-6-phenyl-1,5,2-dioxazinane-2,3-dicarboxylate (6)
IR (neat): 2987, 2900, 1713, 1449, 1304, 1098, 1065 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 7.78 (ddt, J = 7.6, 5.7, 0.9 Hz, 2 H), 7.77–7.62 (m, 2 H), 7.56–7.52 (m, 2 H), 7.46–7.27 (m, 7
H), 4.76–4.65 (m, 2 H), 4.45 (dd, J = 10.5, 7.7 Hz, 1 H), 4.38 (dd, J = 3.9, 1.6 Hz, 2 H), 4.33 (t, J = 7.1 Hz, 1 H), 4.20 (qd, J = 7.1, 1.6 Hz, 2 H), 1.78 (s, 3 H), 1.20 (t, J = 7.1 Hz, 3 H).
13 C NMR (126 MHz, CDCl3 ): δ = 168.07 (CO), 156.52 (CO), 144.05 (C), 143.43 (C), 141.57 (C), 141.46 (C), 140.67
(C), 128.82 (CH), 128.30 (2 CH), 127.97 (2 CH)*, 127.92 (2 CH), 127.25 (2 CH)*, 127.20
(2 CH), 125.66 (CH), 125.35 (2 CH), 125.24 (CH), 120.14 (2 CH)*, 120.10 (2 CH), 103.89
(C), 68.23 (CH2 ), 62.16 (CH2 ), 59.91 (CH2 ), 57.53 (CH), 47.14 (CH), 21.58 (CH3 ), 14.22 (CH3 ); * signals of rotamers/diastereomers.
HRMS (MALDI): m /z [M + H]+ calcd for C28 H28 NO6 : 474.1911; found: 474.1907.
7-Ethyl 6-(9H -Fluoren-9-ylmethyl) (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-6,7-dicarboxylate (12)
7-Ethyl 6-(9H -Fluoren-9-ylmethyl) (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-6,7-dicarboxylate (12)
IR (neat): 3674, 2987, 2901, 1714, 1450, 1408, 1313, 1058 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 7.83–7.78 (m, 2 H), 7.78–7.62 (m, 2 H), 7.48–7.41 (m, 2 H), 7.38–7.31 (m, 2
H), 4.66 (dd, J = 10.3, 6.6 Hz, 1 H), 4.55 (s, 1 H), 4.43 (t, J = 9.2 Hz, 1 H), 4.40–4.33 (m, 2 H), 4.30 (q, J = 7.1 Hz, 2 H), 4.05 (dd, J = 11.5, 3.8 Hz, 1 H), 2.49–2.36 (m, 2 H), 2.36–2.24 (m, 2 H), 1.99–1.80 (m, 2 H),
1.29 (t, J = 7.1 Hz, 3 H).
13 C NMR (126 MHz, CDCl3 ): δ = 168.06 (CO), 156.43 (CO), 144.05 (2 C)*, 143.37 (2 C), 141.50 (2 C)*, 141.43
(2 C), 127.98 (2 CH)*, 127.93 (2 CH), 127.25 (2 CH)*, 127.12 (2 CH), 125.58 (2 CH)*,
125.18 (2 CH), 120.15 (2 CH)*, 120.13 (2 CH), 104.99 (C), 68.50 (CH2 ), 62.34 (CH2 ), 60.27 (CH2 ), 57.22 (CH), 47.03 (CH), 32.70 (CH2 ), 30.37 (CH2 ), 14.23 (CH3 ), 11.59 (CH2 ); * signals of rotamers/diastereomers.
HRMS (ESI): m /z [M + Na]+ calcd for C24 H25 NNaO6 : 446.1574; found: 446.1575.
7-Benzyl 6-(9H -Fluoren-9-ylmethyl) (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-6,7-dicarboxylate (19)
7-Benzyl 6-(9H -Fluoren-9-ylmethyl) (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-6,7-dicarboxylate (19)
IR (neat): 3674, 2987, 2900, 1746, 1716, 1451, 1407, 1260, 1098, 1065 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 7.77 (dq, J = 7.6, 1.1 Hz, 2 H), 7.75–7.54 (m, 2 H), 7.47–7.21 (m, 9 H), 5.25 (s, 2 H), 4.56
(dd, J = 10.4, 6.7 Hz, 2 H), 4.40–4.31 (m, 2 H), 4.22 (t, J = 7.4 Hz, 1 H), 4.17–4.00 (m, 1 H), 2.50–2.19 (m, 4 H), 1.99–1.78 (m, 2 H).
13 C NMR (126 MHz, CDCl3 ): δ = 168.05 (CO), 156.45 (CO), 144.47 (2 C)*, 144.05 (2 C)*, 143.34 (2 C), 141.66
(2 C)*, 141.49 (2 C*), 141.41 (2 C), 135.22 (C), 128.63 (2 CH), 128.44 (CH), 128.09
(2 CH), 127.97 (2 CH)*, 127.91 (2 CH)*, 127.73 (2 CH), 127.24 (2 CH)*, 127.11 (2 CH),
125.60 (2 CH)*, 125.18 (2 CH), 124.84 (2 CH), 120.20 (2 CH)*, 120.13 (2 CH)*, 120.10
(2 CH), 105.02 (C), 68.47 (CH2 ), 67.87 (CH2 ), 60.30 (CH2 ), 57.34 (CH), 46.96 (CH), 32.72 (CH2 ), 30.41 (CH2 ), 11.60 (CH2 ); * signals of rotamers/diastereomers.
HRMS (ESI): m /z [M + NH4 ]+ calcd for C29 H31 N2 O6 : 503.2177; found: 503.2174.
7-Benzyl 6-(9H -Fluoren-9-ylmethyl) (S )-2-Bromo-5,9-dioxa-6-azaspiro[3.5]nonane-6,7-dicarboxylate (20)
7-Benzyl 6-(9H -Fluoren-9-ylmethyl) (S )-2-Bromo-5,9-dioxa-6-azaspiro[3.5]nonane-6,7-dicarboxylate (20)
IR (neat): 3674, 2987, 2900, 1732, 1720, 1406, 1393, 1275, 1065, 1056 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.76 (ddd, J = 8.4, 2.7, 1.0 Hz, 2 H), 7.55 (dd, J = 33.2, 7.5 Hz, 2 H), 7.43–7.22 (m, 9 H), 5.19 (s, 2 H), 4.62–4.32 (m, 4 H), 4.24–4.04
(m, 2 H), 3.90 (dd, J = 11.6, 3.7 Hz, 1 H), 3.03–2.87 (m, 2 H), 2.70–2.46 (m, 2 H).
13 C NMR (101 MHz, CDCl3 ): δ = 167.56 (CO), 156.01 (CO), 143.81 (2 C)*, 143.15 (2 C), 141.53 (2 C)*, 141.44
(2 C), 135.04 (C), 128.65 (2 CH), 128.52 (CH), 128.12 (2 CH), 128.03 (2 CH)*, 128.01
(2 CH), 127.26 (2 CH)*, 127.19 (2 CH), 125.19 (2 CH)*, 124.94 (2 CH), 120.20 (2 CH)*,
120.12 (2 CH), 102.37 (C), 67.97 (CH2 ), 65.98 (CH2 ), 60.86 (CH2 ), 57.26 (CH), 47.07 (CH), 45.50 (CH2 ), 43.97 (CH2 ), 31.60 (CH); * signals of rotamers/diastereomers.
HRMS (MALDI/ESI): m /z [M + Na]+ calcd for C29 H26 BrNNaO6 : 586.0836; found: 586.0835.
(S )-7-(Benzyloxycarbonyl)-6-[(9H -fluoren-9-ylmethoxy)carbonyl]-5,9-dioxa-6-azaspiro[3.5]nonane-2-carboxylic Acid (21a)
(S )-7-(Benzyloxycarbonyl)-6-[(9H -fluoren-9-ylmethoxy)carbonyl]-5,9-dioxa-6-azaspiro[3.5]nonane-2-carboxylic Acid (21a)
IR (neat): 3674, 2987, 2900, 1736, 1450, 1393, 1264, 1105, 1065 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 10.67 (br s, 1 H), 7.81–7.73 (m, 2 H), 7.72–7.52 (m, 2 H), 7.48–7.21 (m, 9
H), 5.25 (s, 2 H), 4.72–4.15 (m, 5 H), 4.11–3.91 (m, 1 H), 3.09–2.95 (m, 1 H), 2.84–2.38
(m, 4 H).
13 C NMR (101 MHz, CDCl3 ): δ = 179.80 (CO)*, 179.74 (CO), 167.74 (CO)*, 167.67 (CO), 156.57 (CO)*, 156.20
(CO), 143.80 (2 C)*, 143.74 (2 C)*, 143.32 (2 C)*, 143.14 (2 C), 141.43 (2 C)*, 141.34
(2 C)*, 141.29 (2 C)*, 141.22 (2 C), 135.03 (C)*, 134.99 (C), 128.57 (2 CH)*, 128.55
(2 CH), 128.42 (CH)*, 128.40 (CH), 128.02 (2 CH)*, 128.01 (2 CH), 127.95 (2 CH)*,
127.93 (2 CH)*, 127.87 (2 CH)*, 127.83 (2 CH), 127.24 (2 CH)*, 127.19 (2 CH)*, 127.10
(2 CH), 125.52 (2 CH)*, 125.31 (2 CH)*, 125.26 (2 CH)*, 124.95 (2 CH), 120.10 (2 CH)*,
120.08 (2 CH)*, 119.96 (2 CH), 101.56 (C), 68.25 (CH2 )*, 67.90 (CH2 )*, 67.87 (CH2 ), 60.53 (CH2 )*, 60.42 (CH2 ), 57.44 (CH), 46.91 (CH)*, 46.72 (CH), 36.34 (CH2 )*, 36.15 (CH2 ), 34.65 (CH2 )*, 34.21 (CH2 ), 28.84 (C), 28.71 (CH); * signals of rotamers/diastereomers.
HRMS (ESI): m /z [M + H]+ calcd for C30 H28 NO8 : 530.1809; found: 530.1808.
7-Benzyl 6-(9H -Fluoren-9-ylmethyl) 2-Methyl (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-2,6,7-tricarboxylate (21)
7-Benzyl 6-(9H -Fluoren-9-ylmethyl) 2-Methyl (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-2,6,7-tricarboxylate (21)
IR (neat): 3674, 2987, 2900, 1729, 1450, 1406, 1285, 1090, 1064 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.80–7.75 (m, 2 H), 7.62 (ddd, J = 41.3, 13.0, 8.3 Hz, 2 H), 7.46–7.20 (m, 9 H), 5.24 (d, J = 3.1 Hz, 2 H), 4.65–4.34 (m, 3 H), 4.36–4.15 (m, 2 H), 4.09–3.94 (m, 1 H), 3.71
(d, J = 23.0 Hz, 3 H), 3.11–2.94 (m, 1 H), 2.85–2.40 (m, 4 H).
13 C NMR (101 MHz, CDCl3 ): δ = 174.67 (CO)*, 174.35 (CO), 171.26 (CO), 167.85 (CO)*, 167.75 (CO), 143.93 (2
C)*, 143.37 (2 C)*, 143.25 (2 C), 141.50 (2 C)*, 141.43 (2 )*, 141.33 (2 C), 135.11
(C), 128.65 (2 CH)*, 128.63 (2 CH), 128.50 (CH)*, 128.48 (CH), 128.12 (2 CH), 128.01
(2 CH)*, 127.97 (2 CH)*, 127.93 (2 CH), 127.36 (2 CH)*, 127.28 (2 CH)*, 127.26 (2
CH)*, 127.15 (2 CH), 125.72 (2 CH)*, 125.37 (2 CH)*, 125.05 (2 CH), 120.17 (2 CH)*,
120.14 (2 CH)*, 120.08 (2 CH)*, 120.05 (2 CH), 101.79 (C), 101.57 (C), 68.90 (CH2 )*, 68.36 (CH2 ), 67.98 (CH2 )*, 67.95 (CH2 ), 60.63 (CH2 )*, 60.53 (CH2 ), 57.57 (CH)*, 57.37 (CH), 52.26 (CH3 ), 46.99 (CH)*, 46.84 (CH), 36.57 (CH2 )*, 36.42 (CH2 ), 34.73 (CH2 )*, 34.28 (CH2 ), 28.85 (C), 28.67 (CH); * signals of rotamers/diastereomers.
HRMS (MALDI/ESI): m /z [M + Na]+ calcd for C31 H29 NNaO8 : 566.1785; found: 566.1786.
7-Benzyl 2-tert -Butyl 6-(9H -Fluoren-9-ylmethyl) (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-2,6,7-tricarboxylate (22)
7-Benzyl 2-tert -Butyl 6-(9H -Fluoren-9-ylmethyl) (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-2,6,7-tricarboxylate (22)
IR (neat): 3674, 2974, 2900, 1722, 1451, 1366, 1283, 1157, 1089, 1012 cm–1 .
1 H NMR (400 MHz, MeOD): δ = 7.79 (ddt, J = 7.6, 3.1, 0.9 Hz, 2 H), 7.61 (dt, J = 27.2, 7.6 Hz, 2 H), 7.51–7.14 (m, 9 H), 5.39–5.02 (m, 3 H), 4.67–3.89 (m, 5 H),
2.98–2.14 (m, 5 H), 1.51–1.40 (m, 9 H).
13 C NMR (101 MHz, MeOD): δ = 175.06 (CO)*, 174.93 (CO), 169.28 (CO)*, 169.17 (CO), 157.46
(CO), 145.13 (2 C)*, 144.99 (2 C)*, 144.70 (2 C), 142.69 (2 C)*, 142.63 (2 C)*, 142.56
(2 C)*, 142.51 (2 C), 136.75 (C)*, 136.69 (C), 129.53 (2 CH)*, 129.49 (2 CH)*, 129.47
(2 CH), 129.28 (CH), 129.08 (2 CH)*, 129.03 (2 CH)*, 128.96 (2 CH), 128.91 (2 CH)*,
128.90 (2 CH), 128.31 (2 CH)*, 128.26 (2 CH)*, 128.22 (2 CH)*, 128.17 (2 CH), 126.52
(2 CH)*, 126.29 (2 CH)*, 126.15 (2 CH)*, 125.96 (2 CH), 120.98 (2 CH)*, 120.94 (2
CH), 102.82 (C)*, 102.75 (C), 81.99 (C)*, 81.93 (C), 69.71 (CH), 69.02 (CH2 )*, 68.62 (CH2 ), 68.56 (CH2 )*, 67.91 (CH2 ), 61.73 (CH2 )*, 61.44 (CH2 ), 59.36 (CH)*, 58.99 (CH), 48.22 (CH)*, 47.98 (CH), 37.03 (CH2 )*, 36.86 (CH2 ), 35.34 (CH2 )*, 34.85 (CH2 ), 31.19 (CH)*, 30.93 (CH)*, 30.59 (CH), 28.29 (3 CH3 )*, 28.25 (3 CH3 ); * signals of rotamers/diastereomers.
HRMS (MALDI/ESI): m /z [M + Na]+ calcd for C34 H35 NNaO8 : 608.2255; found: 608.2257.
6-[(9H -Fluoren-9-yl)methyl] 2-Methyl (S )-7-{(S )-3-[2-{(S )-1-[(2-Amino-2-oxoethyl)amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl}hydrazineyl]-2-oxobutanoyl}-5,9-dioxa-6-azaspiro[3.5]nonane-2,6-dicarboxylate
(30)
6-[(9H -Fluoren-9-yl)methyl] 2-Methyl (S )-7-{(S )-3-[2-{(S )-1-[(2-Amino-2-oxoethyl)amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl}hydrazineyl]-2-oxobutanoyl}-5,9-dioxa-6-azaspiro[3.5]nonane-2,6-dicarboxylate
(30)
HRMS (ESI): m /z [M + Na]+ calcd for C38 H41 N5 NaO11 : 766.2695; found: 766.2696.
HPLC (Shiseido Capcell Pak UG80 C18 column (4.6 × 250 mm), heated to 60 °C, 10 to
90% CH3 CN with 0.1% TFA in 20 min): t
R = 24.8 min.
Segment 33
HRMS (ESI): m /z [M]+ calcd for C282 H431 BrN70 O83 S2 : 6269.0282; found: 6269.0453.
HPLC (Shiseido Capcell Pak UG80 C18 column (4.6 × 250 mm), heated to 60 °C, 10 to
90% CH3 CN with 0.1% TFA in 20 min): t
R = 24.9 min.
Segment 34
HRMS (ESI): m /z [M]+ calcd for C284 H434 N70 O85 S2 : 6249.1231; found: 6249.0065.
HPLC (Shiseido Capcell Pak UG80 C18 column (4.6 × 250 mm), heated to 60 °C, 10 to
90% CH3 CN with 0.1% TFA in 20 min): t
R = 24.5 min.
Segment 35
HRMS (ESI): m /z [M]+ calcd for C284 H433 N69 O85 S2 : 6234.1122; found: 6235.1309.
HPLC (Shiseido Capcell Pak UG80 C18 column (4.6 × 250 mm), heated to 60 °C, 10 to
90% CH3 CN with 0.1% TFA in 20 min): t
R = 24.1 min.
Acetal Formation with p -Toluenesulfonic Acid Monohydrate; General Procedure
Acetal Formation with p -Toluenesulfonic Acid Monohydrate; General Procedure
Dimethyl acetal (2.00 equiv) and p -toluenesulfonic acid monohydrate (0.10 equiv) were added to 5 (1.00 equiv) in DMF (0.05 M). The solution was stirred at 50 °C under vacuum for
4 h. The resulting dark brown viscous gel was diluted with CH2 Cl2 and sat. aq NaHCO3 solution was added to the solution. The aqueous layer was extracted with CH2 Cl2 (2 ×). The combined organic layers were washed with brine and dried (MgSO4 ). The drying agent was removed by filtration and the solvent was evaporated. The
residue was purified by flash chromatography.
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-(4-Bromophenyl)-1,5,2-dioxazinane-2,3-dicarboxylate (7)
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-(4-Bromophenyl)-1,5,2-dioxazinane-2,3-dicarboxylate (7)
IR (neat): 3674, 2986, 2900, 1719, 1449, 1304, 1209, 1084 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.79–7.20 (m, 12 H), 5.66 (s, 1 H), 4.80–4.63 (m, 3 H), 4.49 (t, J = 9.9 Hz, 1 H), 4.34–4.23 (m, 3 H), 4.20–4.06 (m, 1 H), 1.26 (t, J = 7.1 Hz, 3 H).
13 C NMR (101 MHz, CDCl3 ): δ = 167.75 (CO), 156.42 (CO), 143.92 (C), 143.11 (C), 141.54 (C), 141.42 (C), 133.85
(C), 131.67 (2 CH), 128.42 (2 CH), 128.02 (2 CH)*, 127.97 (2 CH), 127.22 (2 CH), 125.66
(2 CH)*, 125.39 (2 CH), 124.21 (CBr), 120.16 (2 CH), 103.06 (CH), 68.35 (CH2 ), 66.12 (CH2 ), 62.41 (CH2 ), 57.26 (CH), 47.12 (CH), 14.27 (CH3 ); * signals of rotamers/diastereomers.
HRMS (ESI): m /z [M + NH4 ]+ calcd for C27 H28 BrN2 O6 : 555.1125; found: 555.1118.
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-[3,5-Bis(trifluoromethyl)phenyl]-1,5,2-dioxazinane-2,3-dicarboxylate (8)
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-[3,5-Bis(trifluoromethyl)phenyl]-1,5,2-dioxazinane-2,3-dicarboxylate (8)
IR (neat): 2970, 2901, 1727, 1450, 1277, 1175, 1132 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 8.22–7.21 (m, 9 H), 5.82 (br s, 1 H), 4.90–4.66 (m, 3 H), 4.58 (dd, J = 10.6, 7.4 Hz, 1 H), 4.38–4.24 (m, 3 H), 4.22–4.09 (m, 1 H), 1.33–1.20 (m, 3 H);
2 Harom not observed.
13 C NMR (101 MHz, CDCl3 ): δ = 167.51 (CO), 141.54 (C), 132.02 (q, J = 33.9 Hz, 2 CF3 ), 128.08 (CH), 127.27 (CH), 125.30 (CH), 123.83 (CH), 120.15 (CH), 101.54 (CH), 68.71
(CH2 ), 66.24 (CH2 ), 62.62 (CH2 ), 57.55, 47.14 (CH), 14.24 (CH3 ); several C not assigned due to mixture of diastereomers and rotamers.
19 F NMR (377 MHz, CDCl3 ): δ = –62.80.
HRMS (ESI): m /z [M + NH4 ]+ calcd for C29 H27 F6 N2 O6 : 613.1768; found: 613.1769.
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-[(Phenylsulfonyl)methyl]-1,5,2-dioxazinane-2,3-dicarboxylate (9)
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-[(Phenylsulfonyl)methyl]-1,5,2-dioxazinane-2,3-dicarboxylate (9)
IR (neat): 2987, 1736, 1447, 1306, 1147, 1116, 1065 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 8.11–7.24 (m, 13 H), 5.05 (ddd, J = 20.8, 6.6, 4.1 Hz, 1 H), 4.50 (ddd, J = 14.1, 10.4, 7.3 Hz, 1 H), 4.45–4.29 (m, 2 H), 4.28–4.19 (m, 2 H), 4.17–4.00 (m,
0.5 H), 3.95 (dd, J = 10.1, 4.2 Hz, 0.5 H), 3.54 (dt, J = 14.5, 7.4 Hz, 1 H), 3.39 (dt, J = 14.3, 4.2 Hz, 1 H), 3.31 (d, J = 6.1 Hz, 2 H), 1.27 (q, J = 7.1 Hz, 3 H).
13 C NMR (126 MHz, CDCl3 ): δ = 168.26 (CO), 157.70 (CO), 143.93 (C), 143.70 (C)*, 141.42 (C), 141.36 (C),
139.67 (C), 139.48 (C), 134.18 (CH), 129.47 (2 CH), 128.15 (2 CH), 128.03 (CH), 127.89
(CH), 127.26 (2 CH), 125.62 (CH), 125.42 (CH), 120.08 (2 CH), 98.92 (CH)*, 97.72 (CH),
68.79 (CH2 )*, 68.72 (CH2 ), 62.22 (CH2 )*, 62.19 (CH2 )*, 61.94 (CH2 ), 59.35 (CH2 )*, 58.27 (CH2 ), 53.83 (CH2 ), 47.05 (CH), 14.27 (CH3 ); * signals of rotamers/diastereomers.
HRMS (ESI): m /z [M + H]+ calcd for C28 H28 NO8 S: 538.1530; found: 538.1524.
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-(4-Nitrophenyl)-1,5,2-dioxazinane-2,3-dicarboxylate (10)
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-(4-Nitrophenyl)-1,5,2-dioxazinane-2,3-dicarboxylate (10)
IR (neat): 3674, 2987, 2901, 1724, 1524, 1450, 1349, 1242, 1080 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 8.26–8.21 (m, 2 H), 7.81–7.52 (m, 6 H), 7.45–7.27 (m, 4 H), 5.67 (s, 1 H),
4.74 (s, 2 H), 4.59 (dd, J = 10.6, 7.2 Hz, 1 H), 4.28 (dq, J = 14.2, 6.9 Hz, 3 H), 4.19–4.04 (m, 2 H), 1.25 (t, J = 7.1 Hz, 3 H).
13 C NMR (126 MHz, CDCl3 ): δ = 167.55 (CO), 156.33 (CO), 148.85 (CNO2 ), 143.90 (2 C)*, 143.09 (2 C), 141.59 (2 C)*, 141.44 (C), 141.00 (2 C), 128.07 (2
CH)*, 128.04 (2 CH), 127.77 (2 CH), 127.24 (2 CH), 125.42 (2 CH)*, 125.29 (2 CH),
123.63 (2 CH), 120.21 (2 CH)*, 120.17 (2 CH), 101.98 (CH), 68.23 (CH2 ), 66.17 (CH2 ), 62.51 (CH2 ), 57.34 (CH), 47.19 (CH), 14.26 (CH3 ); * signals of rotamers/diastereomers.
HRMS (ESI): m /z [M + Na]+ calcd for C27 H24 N2 NaO8 : 527.1425; found: 527.1425.
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-Ethoxy-1,5,2-dioxazinane-2,3-dicarboxylate (11)
3-Ethyl 2-(9H -Fluoren-9-ylmethyl) (3S )-6-Ethoxy-1,5,2-dioxazinane-2,3-dicarboxylate (11)
IR (neat): 2674, 2986, 2901, 1741, 1450, 1355, 1176, 1057 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 7.86–7.61 (m, 4 H), 7.47–7.31 (m, 4 H), 5.43 (s, 1 H), 4.72–4.61 (m, 2 H),
4.57–4.31 (m, 2 H), 4.28 (q, J = 7.1 Hz, 2 H), 4.14–4.04 (m, 1 H), 3.88 (ddq, J = 44.5, 9.6, 7.1 Hz, 2 H), 1.37–1.24 (m, 6 H); 1 H not observed.
13 C NMR (126 MHz, CDCl3 ): δ = 167.46 (CO), 156.01 (CO), 143.85 (2 C)*, 143.31 (2 C), 141.50 (2 C)*, 141.44
(2 C), 128.02 (2 CH)*, 127.98 (2 CH), 127.26 (2 CH)*, 127.24 (2 CH), 125.50 (2 CH)*,
125.28 (2 CH), 120.15 (2 CH), 113.06 (CH), 68.54 (CH2 ), 64.90 (CH2 ), 63.20 (CH2 ), 62.45 (CH2 ), 47.07 (CH), 15.28 (CH3 ), 14.24 (CH3 ); * signals of rotamers/diastereomers.; 1 C not observed.
HRMS (ESI): m /z [M + NH4 ]+ calcd for C23 H29 N2 O7 : 445.1969; found: 445.1966.
Fmoc Deprotection of Acid-Protected Monomer; General Procedure
Fmoc Deprotection of Acid-Protected Monomer; General Procedure
Piperidine (5.00 equiv) was added dropwise to Fmoc-protected monomer (1.00 equiv)
in CH2 Cl2 (0.025 M). The reaction was stirred for 1 h at r.t. The solution was diluted with
CH2 Cl2 and sat. aq NH4 Cl solution was added. The phases were separated and the aqueous layer was extracted
with CH2 Cl2 (2 ×). The combined organic layers were washed with brine and dried (Na2 SO4 ). The drying agent was removed by filtration and the solvent was evaporated. The
residue was purified by flash chromatography.
Ethyl (3S )-6-(4-Bromophenyl)-1,5,2-dioxazinane-3-carboxylate (15)
Ethyl (3S )-6-(4-Bromophenyl)-1,5,2-dioxazinane-3-carboxylate (15)
IR (neat): 3674, 2986, 2901, 1732, 1490, 1369, 1210, 1043 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 7.50–7.45 (m, 2 H), 7.32–7.28 (m, 2 H), 6.86 (br s, 1 H), 5.80 (s, 1 H), 4.66
(dd, J = 11.4, 1.4 Hz, 1 H), 4.38–4.26 (m, 3 H), 3.52 (dd, J = 3.2, 1.4 Hz, 1 H), 1.34 (t, J = 7.1 Hz, 3 H).
13 C NMR (126 MHz, CDCl3 ): δ = 170.61 (CO), 135.50 (C), 131.53 (2 CH), 128.30 (2 CH), 123.58 (CBr), 101.88
(CH), 65.27 (CH2 ), 62.07 (CH2 ), 58.68 (CH), 14.39 (CH3 ).
HRMS (ESI): m /z [M + H]+ calcd for C12 H15 BrNO4 : 316.0179; found: 316.0178.
Ethyl (3S )-6-(4-Nitrophenyl)-1,5,2-dioxazinane-3-carboxylate (16)
Ethyl (3S )-6-(4-Nitrophenyl)-1,5,2-dioxazinane-3-carboxylate (16)
IR (neat): 3674, 2987, 2901, 1734, 1522, 1348, 1214, 1044 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 8.22–8.18 (m, 2 H), 7.64–7.56 (m, 2 H), 6.94 (s, 1 H), 5.93 (s, 1 H), 4.70
(dt, J = 11.4, 1.4 Hz, 1 H), 4.37–4.29 (m, 3 H), 3.56 (dd, J = 3.3, 1.4 Hz, 1 H), 1.34 (t, J = 7.1 Hz, 3 H).
13 C NMR (126 MHz, CDCl3 ): δ = 170.45 (CO), 148.55 (CNO2 ), 142.82 (C), 127.64 (2 CH), 123.56 (2 CH), 100.98 (CH), 65.34 (CH2 ), 62.20 (CH2 ), 58.73 (CH), 14.40 (CH3 ).
HRMS (ESI): m /z [M + H]+ calcd for C12 H15 N2 O6 : 283.0925; found: 283.0927.
Ethyl (3S )-6-Ethoxy-1,5,2-dioxazinane-3-carboxylate (17)
Ethyl (3S )-6-Ethoxy-1,5,2-dioxazinane-3-carboxylate (17)
IR (neat): 3674, 2987, 2900, 1736, 1393, 1250, 1074, 1056 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 6.37 (d, J = 119.9 Hz, 1 H), 5.43 (dd, J = 11.2, 0.5 Hz, 1 H), 4.43–4.35 (m, 1 H), 4.26 (p, J = 7.2 Hz, 2 H), 4.09–4.01 (m, 1 H), 3.89–3.66 (m, 3 H), 1.33–1.28 (m, 3 H), 1.28–1.23
(m, 3 H).
13 C NMR (126 MHz, CDCl3 ): δ = 169.44 (CO)*, 168.41 (CO), 111.02 (CH)*, 110.47 (CH), 62.92 (CH2 )*, 62.69 (CH2 ), 62.63 (CH2 )*, 62.46 (CH2 ), 61.97 (CH2 )*, 61.89 (CH2 ), 57.65 (CH)*, 57.53 (CH), 15.16 (CH3 ), 14.28 (CH3 )*, 14.26 (CH3 ); * signals of diastereomers.
HRMS (ESI): m /z [M + Na]+ calcd for C8 H15 NNaO5 : 228.0842; found: 228.0842.
Ethyl (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-7-carboxylate (18)
Ethyl (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-7-carboxylate (18)
IR (neat): 3674, 2987, 2901, 1733, 1451, 1375, 1280, 1079, 1020 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 4.26 (q, J = 7.2 Hz, 2 H), 4.07 (d, J = 4.4 Hz, 2 H), 3.67 (t, J = 4.4 Hz, 1 H), 2.44–2.14 (m, 4 H), 1.81–1.71 (m, 2 H), 1.30 (t, J = 7.1 Hz, 3 H); NH not observed.
13 C NMR (126 MHz, CDCl3 ): δ = 169.68 (CO), 103.05 (C), 61.79 (CH2 ), 60.59 (CH2 ), 58.37 (CH), 32.30 (CH2 ), 31.64 (CH2 ), 14.28 (CH3 ), 11.85 (CH2 ).
HRMS (ESI): m /z [M + H]+ calcd for C9 H16 NO4 : 202.1074; found: 202.1074.
7-Benzyl 2-Methyl (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-2,7-dicarboxylate (24)
7-Benzyl 2-Methyl (S )-5,9-Dioxa-6-azaspiro[3.5]nonane-2,7-dicarboxylate (24)
IR (neat): 3674, 2987, 2900, 2253, 1733, 1453, 1393, 1258, 1065, 903 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 7.45–7.27 (m, 5 H), 6.18 (s, 1 H), 5.29–5.21 (m, 2 H), 4.21–4.03 (m, 2 H),
3.70 (d, J = 1.1 Hz, 3 H), 3.66 (t, J = 3.8 Hz, 1 H), 2.99–2.40 (m, 5 H).
13 C NMR (126 MHz, CDCl3 ): δ = 175.15 (CO), 169.67 (CO), 135.29 (C), 128.78 (2 CH), 128.66 (CH), 128.39 (2
CH)*, 128.37 (2 CH), 100.02 (C)*, 99.91 (C), 67.47 (CH2 ), 60.68 (CH2 )*, 60.61 (CH2 ), 58.49 (CH)*, 58.41 (CH), 52.14 (CH)*, 52.12 (CH), 36.54 (CH2 )*, 36.37 (CH2 ), 35.54 (CH2 )*, 35.31 (CH2 ), 29.09 (CH)*, 28.96 (CH); * signals of rotamers/diastereomers.
HRMS (ESI): m /z [M + H]+ calcd for C16 H20 NO6 : 322.1285; found: 322.1286.
Benzyl (S )-2-Bromo-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylate (25)
Benzyl (S )-2-Bromo-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylate (25)
IR (neat): 3674, 3296, 2987, 2900, 1738, 1454, 1282, 1198, 1065 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 7.44–7.33 (m, 5 H), 6.23 (s, 1 H), 5.33–5.23 (m, 2 H), 4.33–4.13 (m, 2 H),
4.10 (ddd, J = 11.5, 3.4, 2.7 Hz, 1 H), 3.68 (dt, J = 7.7, 3.9 Hz, 1 H), 3.37–2.57 (m, 4 H).
13 C NMR (126 MHz, CDCl3 ): δ = 169.55 (CO)*, 169.45 (CO), 135.23 (C), 128.80 (2 CH), 128.71 (CH), 128.41 (2
CH)*, 128.39 (2 CH), 100.62 (C), 67.55 (CH2 ), 60.88 (CH2 ), 58.44 (CH)*, 58.41 (CH), 45.95 (CH2 )*, 45.78 (CH2 ), 44.90 (CH2 )*, 44.57 (CH2 ), 32.98 (CH)*, 32.75 (CH); * signals of rotamers/diastereomers.
HRMS (ESI): m /z [M + H]+ calcd for C14 H17 BrNO4 : 342.0335; found: 342.0331.
Benzyl Deprotection; General Procedure
Benzyl Deprotection; General Procedure
Pd(OH)2 /charcoal (20% on carbon wetted with ca. 50% water) (6% m/m) was added to a solution
of benzyl-protected acid (1.00 equiv) in CH2 Cl2 /EtOH (1:4) at 0 °C. The mixture was stirred under H2 atmosphere for 1 h while gradually warming up to r.t. The mixture was filtered through
a plug of celite and the solvent was evaporated.
(S )-6-[(9H -Fluoren-9-ylmethoxy)carbonyl]-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylic Acid (26)
(S )-6-[(9H -Fluoren-9-ylmethoxy)carbonyl]-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylic Acid (26)
IR (neat): 3674, 2987, 2900, 1717, 1450, 1394, 1266, 1133, 1065 cm–1 .
1 H NMR (500 MHz, CDCl3 ): δ = 8.65 (br s, 1 H), 7.79–7.73 (m, 2 H), 7.64 (d, J = 45.5 Hz, 2 H), 7.44–7.37 (m, 2 H), 7.31 (tt, J = 7.4, 1.1 Hz, 2 H), 4.66 (dd, J = 10.5, 6.2 Hz, 1 H), 4.49 (s, 2 H), 4.38–4.22 (m, 2 H), 4.01 (s, 1 H), 2.44–2.18
(m, 4 H), 1.87 (dtd, J = 19.3, 12.1, 10.7, 7.0 Hz, 2 H).
13 C NMR (126 MHz, CDCl3 ): δ = 173.61 (CO), 156.39 (CO), 143.82 (2 C)*, 143.19 (2 C), 141.50 (2 C)*, 141.48
(2 C), 128.05 (2 CH)*, 127.98 (2 CH), 127.39 (2 CH)*, 127.17 (2 CH), 125.42 (2 CH)*,
125.08 (2 CH), 120.14 (2 CH), 105.24 (C), 68.62 (CH2 ), 60.08 (CH2 ), 56.89 (CH), 46.99 (CH), 32.60 (CH2 ), 30.25 (CH2 ), 11.47 (CH2 ); * signals of rotamers.
HRMS (ESI): m /z [M + Na]+ calcd for C22 H21 NNaO6 : 418.1261; found: 418.1261.
(S )-6-[(9H -Fluoren-9-ylmethoxy)carbonyl]-2-(methoxycarbonyl)-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylic
Acid (27)
(S )-6-[(9H -Fluoren-9-ylmethoxy)carbonyl]-2-(methoxycarbonyl)-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylic
Acid (27)
IR (neat): 3674, 2987, 2900, 1730, 1606, 1450, 1266, 1224, 1065 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.78–7.73 (m, 2 H), 7.72–7.49 (m, 2 H), 7.45–7.28 (m, 4 H), 4.70–4.25 (m, 5
H), 4.14–3.91 (m, 1 H), 3.71 (d, J = 20.1 Hz, 3 H), 3.10–2.25 (m, 4 H).
13 C NMR (101 MHz, CDCl3 ): δ = 174.71 (CO)*, 174.37 (CO), 172.75 (CO)*, 172.68 (CO), 158.09 (CO), 143.85 (2
C)*, 143.33 (2 C)*, 143.19 (2 C), 141.50 (2 C)*, 141.49 (2 C)*, 141.43 (2 C)*, 141.40
(2 C), 128.04 (2 CH)*, 127.99 (2 CH), 127.95 (CH), 127.39 (2 CH)*, 127.37 (2 CH),
127.19 (2 CH)*, 127.06 (2 CH)*, 127.04 (2 CH), 125.61 (2 CH)*, 125.32 (2 CH)*, 125.25
(2 CH)*, 125.02 (2 CH), 120.16 (2 CH)*, 120.09 (2 CH), 101.88 (C)*, 101.65 (C), 68.97
(CH2 )*, 68.34 (CH2 ), 60.52 (CH2 )*, 60.42 (CH2 ), 52.30 (CH3 ), 47.06 (CH)*, 46.89 (CH), 36.54 (CH2 )*, 36.37 (CH2 ), 34.60 (CH2 )*, 34.20 (CH2 ), 28.79 (CH), 28.67 (C); * signals of rotamers/diastereomers.
HRMS (MALDI/ESI): m /z [M + Na]+ calcd for C24 H23 NNaO8 : 476.1316; found: 476.1316.
(S )-2-Bromo-6-[(9H -fluoren-9-ylmethoxy)carbonyl]-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylic Acid (28)
(S )-2-Bromo-6-[(9H -fluoren-9-ylmethoxy)carbonyl]-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylic Acid (28)
IR (neat): 3674, 2987, 2900, 1717, 1450, 1408, 1283, 1264, 1139, 1067 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 9.23 (br s, 1 H), 7.82–7.73 (m, 2 H), 7.59 (dd, J = 24.6, 7.5 Hz, 2 H), 7.46–7.28 (m, 4 H), 4.67 (d, J = 5.9 Hz, 2 H), 4.36–4.21 (m, 2 H), 4.20–3.97 (m, 1 H), 3.96–3.85 (m, 1 H), 2.95
(d, J = 15.7 Hz, 2 H), 2.70–2.45 (m, 2 H); 1 H not observed.
13 C NMR (101 MHz, CDCl3 ): δ = 173.11 (CO), 155.77 (CO), 143.71 (2 C)*, 143.08 (2 C), 141.55 (2 C)*, 141.51
(2 C), 128.09 (2 CH)*, 128.05 (2 CH), 127.37 (2 CH)*, 127.26 (2 CH), 125.05 (2 CH)*,
124.90 (2 CH), 120.21 (2 CH)*, 120.15 (2 CH), 102.49 (C), 68.01 (CH2 ), 60.71 (CH2 ), 47.16 (CH), 45.42 (CH2 ), 43.85 (CH2 ), 31.46 (CH); * signals of rotamers/diastereomers; 1 C not observed.
HRMS (MALDI/ESI): m /z [M + Na]+ calcd for C22 H20 BrNNaO6 : 496.0366; found: 496.0367.
(S )-2-(tert -Butoxycarbonyl)-6-[(9H -fluoren-9-ylmethoxy)carbonyl]-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylic Acid (29)
(S )-2-(tert -Butoxycarbonyl)-6-[(9H -fluoren-9-ylmethoxy)carbonyl]-5,9-dioxa-6-azaspiro[3.5]nonane-7-carboxylic Acid (29)
IR (neat): 3674, 2976, 2901, 1719, 1450, 1366, 1283, 1135, 1060 cm–1 .
1 H NMR (400 MHz, CDCl3 ): δ = 7.80–7.55 (m, 4 H), 7.44–7.28 (m, 4 H), 4.74–3.61 (m, 6 H), 3.03–2.01 (m, 5
H), 1.46 (d, J = 19.5 Hz, 9 H); OH not observed.
13 C NMR (101 MHz, CDCl3 ): δ = 173.54 (CO)*, 173.23 (CO), 173.10 (CO)*, 173.01 (CO), 156.42 (CO), 143.86 (2
C)*, 143.32 (2 C)*, 143.19 (2 C), 141.49 (2 C)*, 141.42 (2 C)*, 141.37 (2 C), 128.03
(2 CH)*, 127.96 (2 CH)*, 127.92 (2 CH), 127.41 (2 CH)*, 127.37 (2 CH)*, 127.19 (2
CH), 125.66 (2 CH)*, 125.34 (2 CH)*, 125.04 (2 CH), 120.16 (2 CH)*, 120.05 (2 CH),
101.97 (C), 101.65 (C), 81.06 (C)*, 81.01 (C), 68.91 (CH2 )*, 68.34 (CH2 ), 60.44 (CH2 )*, 60.38 (CH2 ), 57.20 (CH), 47.04 (CH), 46.88 (CH), 36.49 (CH2 )*, 36.21 (CH2 ), 34.49 (CH2 )*, 34.01 (CH2 ), 29.93 (CH)*, 29.70 (CH), 28.18 (3 CH3 ); * signals of rotamers/diastereomers.
HRMS (MALDI/ESI): m /z [M + Na]+ calcd for C27 H29 NNaO8 : 518.1785; found: 518.1783.
KAHA Ligation; General Procedure
KAHA Ligation; General Procedure
α-Ketoacid 13 (1.20 equiv) was added to the free hydroxylamine (1.00 equiv) and dissolved in HFIP/AcOH
(1:1, 30 mM) containing 1% water. The mixture was heated to 45 °C for 12 h with monitoring
by analytical HPLC. The crude mixture was directly purified by preparative HPLC (Shiseido
Capcell Pak C18 column, 50 × 250 mm) heated to 60 °C using a gradient of 5 to 80%
MeCN in Milipore-H2 O containing 0.1% (v/v) TFA over 35 min. HPLC monitoring of the KAHA ligation was
carried out using Shiseido Capcell Pak UG80 C18 column (4.6 × 250 mm), heated to 60 °C,
using a gradient of 10 to 90% MeCN in Milipore-H2 O containing 0.1% (v/v) TFA over 20 min.
Ethyl N -[3-(4-Nitrophenyl)propanoyl]-l -serinate (14)
Ethyl N -[3-(4-Nitrophenyl)propanoyl]-l -serinate (14)
IR (neat): 3384, 2987, 2901, 1734, 1646, 1517, 1451, 1346, 1228, 1056 cm–1 .
1 H NMR (500 MHz, MeOD): δ = 8.19–8.13 (m, 2 H), 7.51–7.46 (m, 2 H), 4.48 (dd, J = 5.1, 4.2 Hz, 1 H), 4.18 (qd, J = 7.2, 2.2 Hz, 2 H), 3.88–3.71 (m, 2 H), 3.07 (td, J = 7.4, 1.3 Hz, 2 H), 2.65 (td, J = 7.5, 2.1 Hz, 2 H), 1.25 (t, J = 7.1 Hz, 3 H).
13 C NMR (126 MHz, MeOD): δ = 174.56 (CO), 171.76 (CO), 150.32 (C), 147.97 (CNO2 ), 130.61 (2 CH), 124.53 (2 CH), 62.80 (CH2 ), 62.46 (CH2 ), 56.27 (CH), 37.50 (CH2 ), 32.27 (CH2 ), 14.43 (CH3 ).
HRMS (ESI): m /z [M + Na]+ calcd for C14 H18 N2 NaO6 : 333.1057; found: 333.1061.
Benzyl N -(3-(4-Nitrophenyl)propanoyl)-l -serinate (23)
Benzyl N -(3-(4-Nitrophenyl)propanoyl)-l -serinate (23)
IR (neat): 2939, 1737, 1643, 1515, 1454, 1343, 1190 cm–1 .
1 H NMR (500 MHz, MeOD): δ = 8.14–8.10 (m, 2 H), 7.47–7.43 (m, 2 H), 7.38–7.28 (m, 5
H), 5.22–5.13 (m, 2 H), 4.55 (dd, J = 5.2, 4.2 Hz, 1 H), 3.90–3.73 (m, 2 H), 3.09–2.99 (m, 2 H), 2.63 (td, J = 7.5, 2.3 Hz, 2 H).
13 C NMR (126 MHz, MeOD): δ = 174.64 (CO), 171.64 (CO), 150.28 (C), 147.95 (CNO2 ), 137.20 (C), 130.57 (2 CH), 129.54 (2 CH), 129.27 (CH), 129.11 (2 CH), 124.52 (2
CH), 68.00 (CH2 ), 62.75 (CH2 ), 56.35 (CH), 37.47 (CH2 ), 32.26 (CH2 ).
HRMS (ESI): m /z [M + Na]+ calcd for C19 H20 N2 NaO6 : 395.1214.1057; found: 395.1218.
(S )-N -(2-amino-2-oxoethyl)-2-(2-((2S ,5S )-6-hydroxy-5-(3-(4-nitrophenyl)propanamido)-3,4-dioxohexan-2-yl)hydrazineyl)-3-(4-hydroxyphenyl)propanamide
(32)
(S )-N -(2-amino-2-oxoethyl)-2-(2-((2S ,5S )-6-hydroxy-5-(3-(4-nitrophenyl)propanamido)-3,4-dioxohexan-2-yl)hydrazineyl)-3-(4-hydroxyphenyl)propanamide
(32)
HRMS (ESI): m /z [M + Na]+ calcd for C26 H32 N6 NaO9 : 595.2123; found: 595.2123.
HPLC (Shiseido Capcell Pak UG80 C18 column (4.6 × 250 mm), heated to 60 °C, 10 to
90% CH3 CN with 0.1% TFA in 20 min): t
R = 19.8 min.
Segment 36
HRMS (ESI): m /z [M]+ calcd for C263 H418 N70 O81 S2 : 5917.0183; found: 5918.0125.
HPLC (Shiseido Capcell Pak UG80 C18 column (4.6 × 250 mm), heated to 60 °C, 10 to
90% CH3 CN with 0.1% TFA in 20 min): t
R = 22.4 min.
